Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 2.8e-85 318.5 157 100.0
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 9.0e-84 313.5 157 98.1
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 3.2e-81 305.1 157 96.2
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.4e-68 263.1 156 84.0
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 2.9e-58 228.8 150 74.7
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 6.9e-52 207.6 160 69.4
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.4e-47 193.4 138 71.0
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 2.2e-45 186.0 147 64.6
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.1e-44 183.7 141 67.4
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.1e-44 183.7 147 63.9
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 1.4e-44 183.3 147 63.9
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 3.4e-43 178.7 147 62.6
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 5.9e-43 177.9 142 66.9
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.8e-42 175.3 141 65.2
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.8e-42 175.3 141 65.2
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.0e-42 174.9 139 66.2
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.5e-41 172.6 147 60.5
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 3.2e-41 172.2 147 63.3
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 7.2e-41 171.0 143 62.9
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 7.2e-41 171.0 154 57.8
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 9.4e-41 170.6 141 64.5
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 1.2e-40 170.2 141 65.2
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 1.2e-40 170.2 141 65.2
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.2e-40 170.2 147 59.9
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 2.7e-40 169.1 148 62.8
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 4.7e-40 168.3 139 61.2
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 6.1e-40 167.9 147 58.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 6.1e-40 167.9 145 64.1
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 7.9e-40 167.5 148 57.4
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 1.0e-39 167.2 142 58.5
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.0e-39 167.2 139 63.3
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 3.9e-39 165.2 157 54.8
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 5.2e-39 164.9 142 63.4
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 5.2e-39 164.9 142 63.4
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 6.7e-39 164.5 147 61.9
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 6.7e-39 164.5 146 56.8
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 8.8e-39 164.1 152 61.8
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 2.0e-38 162.9 147 61.2
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 2.0e-38 162.9 139 59.0
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.0e-38 162.9 145 59.3
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 2.6e-38 162.5 145 60.0
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 3.3e-38 162.2 146 60.3
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 4.4e-38 161.8 141 63.8
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 9.7e-38 160.6 145 61.4
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 2.2e-37 159.5 142 59.9
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 3.7e-37 158.7 149 56.4
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 4.8e-37 158.3 151 58.3
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 6.3e-37 157.9 146 58.9
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 6.3e-37 157.9 144 56.9
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 6.3e-37 157.9 142 58.5
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 8.2e-37 157.5 143 57.3
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 8.2e-37 157.5 141 57.4
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.1e-36 157.1 158 54.4
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.8e-36 156.4 147 57.1
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.4e-36 156.0 148 56.8
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 5.3e-36 154.8 148 57.4
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 5.3e-36 154.8 140 56.4
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.3e-36 154.8 158 54.4
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 7.0e-36 154.5 127 63.0
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.6e-35 153.3 148 58.1
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 2.0e-35 152.9 153 54.2
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 2.0e-35 152.9 127 62.2
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 2.6e-35 152.5 142 57.0
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 2.6e-35 152.5 142 59.2
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 2.6e-35 152.5 144 59.0
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 3.5e-35 152.1 142 54.9
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 4.5e-35 151.8 142 57.0
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.3e-34 150.2 142 56.3
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.3e-34 150.2 142 56.3
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 1.3e-34 150.2 142 56.3
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.3e-34 150.2 142 56.3
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.7e-34 149.8 142 56.3
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.7e-34 149.8 142 56.3
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.7e-34 149.8 142 56.3
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 2.9e-34 149.1 137 60.6
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 5.0e-34 148.3 142 57.0
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.1e-33 147.1 143 55.9
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.1e-33 147.1 166 50.0
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 5.5e-33 144.8 173 50.3
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 1.2e-32 143.7 152 50.0
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 2.1e-32 142.9 138 59.4
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.8e-31 139.8 147 51.0
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 4.0e-31 138.7 94 72.3
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.2e-30 137.1 172 47.7
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 1.5e-30 136.7 141 56.0
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 2.0e-30 136.3 136 52.9
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.7e-29 133.3 137 54.7
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 2.2e-29 132.9 96 66.7
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 4.8e-29 131.7 129 55.8
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.1e-28 130.6 71 85.9
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.4e-28 130.2 200 40.5
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.4e-28 130.2 104 65.4
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.4e-28 129.4 151 49.7
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.3e-28 128.3 118 57.6
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.0e-28 127.9 118 56.8
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 1.0e-26 124.0 77 77.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.0e-26 124.0 71 77.5
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.7e-26 123.2 77 76.6
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 6.5e-26 121.3 102 57.8
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-25 120.6 70 78.6
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 1.1e-25 120.6 96 60.4
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 3.2e-25 119.0 72 76.4
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 4.7e-24 115.2 176 42.0
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 5.2e-23 111.7 143 47.6
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 2.6e-22 109.4 71 60.6
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 5.7e-22 108.2 74 68.9
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 1.3e-21 107.1 98 58.2
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 6.3e-21 104.8 139 44.6
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.8e-20 103.2 151 37.1
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.1e-20 102.4 196 33.2
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.2e-19 100.5 152 38.2
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 3.6e-16 89.0 148 36.5
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 6.1e-16 88.2 180 31.7
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 6.8e-15 84.7 54 72.2
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.2e-13 79.7 56 64.3
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 7.0e-12 74.7 141 38.3
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 7.0e-12 74.7 97 45.4
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 8.6e-10 67.8 68 44.1
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 8.0e-08 61.2 69 43.5
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 4.4e-06 55.5 74 35.1
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 9.8e-06 54.3 130 27.7


User provided reference genes

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