Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 8.5e-266 919.8 489 100.0
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 3.7e-261 904.4 485 98.6
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 8.9e-247 856.7 485 94.2
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 6.6e-226 787.3 491 86.8
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 6.4e-205 717.6 487 80.9
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 2.3e-202 709.1 485 82.3
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 2.7e-139 499.6 276 90.6
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 5.2e-114 415.6 368 60.9
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 4.4e-113 412.5 483 54.0
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 2.1e-107 393.7 481 53.4
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 6.2e-107 392.1 479 54.3
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 6.8e-106 388.7 477 53.9
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 5.8e-105 385.6 483 51.8
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 9.9e-105 384.8 445 51.2
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 1.3e-104 384.4 467 53.7
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 2.9e-104 383.3 485 48.9
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 4.9e-104 382.5 473 52.0
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 5.4e-103 379.0 491 51.7
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 1.2e-102 377.9 533 48.0
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.6e-102 377.5 493 51.9
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 3.5e-102 376.3 482 49.2
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 4.6e-102 375.9 469 51.4
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 7.8e-102 375.2 473 51.8
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 1.0e-101 374.8 473 51.8
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 2.5e-100 370.2 472 51.7
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 4.3e-100 369.4 468 50.0
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 4.3e-100 369.4 500 50.0
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 7.3e-100 368.6 514 46.5
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 3.6e-99 366.3 479 50.3
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 6.2e-99 365.5 467 49.3
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 5.2e-98 362.5 371 53.4
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 4.2e-95 352.8 492 48.8
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 5.4e-95 352.4 493 51.1
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 9.3e-95 351.7 397 50.4
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 1.2e-94 351.3 484 48.6
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 2.1e-94 350.5 503 47.9
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 1.3e-93 347.8 387 49.6
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 3.9e-93 346.3 389 51.9
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 6.6e-93 345.5 495 49.5
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 3.3e-92 343.2 461 50.5
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 7.3e-92 342.0 476 50.8
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 1.6e-91 340.9 475 49.9
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 6.2e-91 339.0 397 48.4
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 2.4e-90 337.0 550 43.5
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 6.9e-90 335.5 354 53.7
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 1.5e-89 334.3 439 45.8
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 2.6e-89 333.6 487 43.9
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 4.5e-89 332.8 496 49.2
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 5.8e-89 332.4 486 47.7
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 1.4e-87 327.8 493 46.7
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 1.4e-87 327.8 478 46.4
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 4.2e-87 326.2 482 45.9
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 5.4e-87 325.9 474 46.6
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 2.7e-86 323.6 484 42.6
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 3.5e-86 323.2 298 56.7
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 4.6e-86 322.8 390 48.5
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 2.3e-85 320.5 476 49.2
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 8.7e-85 318.5 490 47.1
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.5e-84 317.0 518 44.8
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 9.6e-84 315.1 411 46.7
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 2.8e-83 313.5 465 50.1
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 3.4e-81 306.6 542 41.5
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 4.5e-81 306.2 386 47.7
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 1.3e-80 304.7 539 41.7
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.3e-80 304.7 402 47.5
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 1.1e-79 301.6 540 41.5
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 1.2e-78 298.1 508 44.3
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 1.6e-78 297.7 502 46.4
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 3.5e-78 296.6 471 46.5
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 3.5e-78 296.6 471 46.5
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 6.0e-78 295.8 485 44.9
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 1.0e-77 295.0 395 47.1
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 1.3e-77 294.7 523 37.7
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 5.1e-77 292.7 554 44.0
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 2.5e-76 290.4 447 44.5
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 2.4e-74 283.9 485 44.7
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 1.2e-73 281.6 378 44.7
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 4.5e-73 279.6 384 51.0
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 6.7e-69 265.8 375 42.9
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 5.7e-68 262.7 262 52.3
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 1.5e-65 254.6 364 42.6
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 4.5e-65 253.1 473 36.4
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.7e-62 243.8 477 43.2
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 3.6e-62 243.4 468 35.7
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 2.3e-61 240.7 206 75.7
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 3.0e-61 240.4 272 51.1
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 2.0e-57 227.6 484 38.6
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 4.5e-57 226.5 506 39.3
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 1.1e-55 221.9 136 81.6
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 2.3e-53 214.2 314 47.8
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 2.6e-52 210.7 265 45.7
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.4e-52 209.9 232 48.3
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 2.0e-49 201.1 281 53.4
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.0e-48 198.7 473 32.8
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 1.9e-47 194.5 467 31.7
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 4.2e-47 193.4 467 31.3
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 6.7e-45 186.0 498 31.5
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 1.4e-42 178.3 315 36.2
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 2.9e-40 170.6 186 52.2
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 6.5e-40 169.5 208 49.0
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.6e-36 157.5 327 36.1
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 1.8e-29 134.8 150 48.7
Cpa.g.sc35.79 Carica papaya HOM05D007081 ORTHO05D008834 1.7e-27 128.3 118 58.5
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 1.7e-24 118.2 402 26.9
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 6.5e-24 116.3 145 44.8
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 8.0e-22 109.4 66 75.8
HPP92_000304 Vanilla planifolia HOM05D007081 ORTHO05D008834 5.2e-21 106.7 103 51.5
CAN.G43.8 Capsicum annuum HOM05D000484 ORTHO05D008834 3.7e-19 100.5 63 71.4
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 8.6e-16 89.4 66 65.2
SEGI_21151 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 1.2e-09 68.9 73 53.4
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 1.9e-07 61.6 63 57.1
Manes.02G081900 Manihot esculenta HOM05D005384 ORTHO05D006477 2.5e-07 61.2 160 30.6
ClCG01G008440 Citrullus lanatus HOM05D005384 ORTHO05D006477 1.6e-06 58.5 211 26.5
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 1.6e-06 58.5 121 33.1
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 2.1e-06 58.2 192 27.6
Mapoly0005s0121 Marchantia polymorpha HOM05D005384 ORTHO05D006477 2.1e-06 58.2 127 35.4
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 4.7e-06 57.0 131 34.4
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 6.2e-06 56.6 159 29.6
Haze_14319 Corylus avellana HOM05D005384 ORTHO05D006477 8.0e-06 56.2 126 33.3
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 8.0e-06 56.2 185 28.1
GSVIVG01013204001 Vitis vinifera HOM05D005384 ORTHO05D006477 8.0e-06 56.2 137 29.2


User provided reference genes

Program Settings