Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g112380.1 Solanum lycopersicum HOM05D000565 ORTHO05D003973 9.1e-37 156.4 78 100.0
Sopen03g031470 Solanum pennellii HOM05D000565 ORTHO05D003973 9.1e-37 156.4 78 100.0
PGSC0003DMG400018179 Solanum tuberosum HOM05D000565 ORTHO05D003973 1.7e-35 152.1 78 97.4
CAN.G338.20 Capsicum annuum HOM05D000565 ORTHO05D003973 6.1e-33 143.7 78 91.0
Peaxi162Scf00089g00146 Petunia axillaris HOM05D000565 ORTHO05D003973 1.3e-30 136.0 79 87.3
Nitab4.5_0005842g0020 Nicotiana tabacum HOM05D000565 ORTHO05D003973 3.7e-30 134.4 79 86.1
Nitab4.5_0005004g0020 Nicotiana tabacum HOM05D000565 ORTHO05D003973 1.4e-29 132.5 79 84.8
Rhsim08G0176300 Rhododendron simsii HOM05D000565 ORTHO05D003973 4.0e-24 114.4 78 75.6
COL.COLO4_30169 Corchorus olitorius HOM05D000565 ORTHO05D003973 7.5e-23 110.2 77 75.3
Hma1.2p1_0046F.1_g027000 Hydrangea macrophylla HOM05D000565 ORTHO05D003973 9.8e-23 109.8 79 72.2
Thecc.03G020700 Theobroma cacao HOM05D000565 ORTHO05D003973 6.3e-22 107.1 69 75.4
vmacro19314 Vaccinium macrocarpon HOM05D000565 ORTHO05D003973 6.3e-22 107.1 78 71.8
Haze_07569 Corylus avellana HOM05D000565 ORTHO05D003973 8.3e-22 106.7 77 74.0
PGR083G2179 Punica granatum HOM05D000565 ORTHO05D003973 8.3e-22 106.7 77 68.8
MD14G1172700 Malus domestica HOM05D000565 ORTHO05D003973 1.1e-21 106.3 70 75.7
Cfa019202 Carpinus fangiana HOM05D000565 ORTHO05D003973 4.1e-21 104.4 77 72.7
Prupe.5G166900 Prunus persica HOM05D000565 ORTHO05D003973 7.0e-21 103.6 70 71.4
TWI23G1050 Tripterygium wilfordii HOM05D000565 ORTHO05D003973 7.0e-21 103.6 78 67.9
MD06G1167100 Malus domestica HOM05D000565 ORTHO05D003973 1.2e-20 102.8 70 71.4
Cpa.g.sc110.10 Carica papaya HOM05D000565 ORTHO05D003973 1.6e-20 102.4 77 70.1
Ciclev10018985m.g Citrus clementina HOM05D000565 ORTHO05D003973 1.6e-20 102.4 77 68.8
Actinidia19353 Actinidia chinensis HOM05D000565 ORTHO05D003973 4.5e-20 100.9 70 72.9
Manes.14G061600 Manihot esculenta HOM05D000565 ORTHO05D003973 7.7e-20 100.1 78 66.7
DCAR_026169 Daucus carota HOM05D000565 ORTHO05D003973 1.7e-19 99.0 77 64.9
Glyma.05G040800 Glycine max HOM05D000565 ORTHO05D003973 1.7e-19 99.0 77 67.5
Potri.015G082800 Populus trichocarpa HOM05D000565 ORTHO05D003973 1.7e-19 99.0 78 65.4
CSS0028629 Camellia sinensis var. sinensis HOM05D000565 ORTHO05D003973 2.3e-19 98.6 67 74.6
FAN04G1641 Fragaria x ananassa HOM05D000565 ORTHO05D003973 2.3e-19 98.6 66 72.7
FAN08G2198 Fragaria x ananassa HOM05D000565 ORTHO05D003973 2.3e-19 98.6 66 72.7
Nn4g22633 Nelumbo nucifera HOM05D000565 ORTHO05D003973 2.9e-19 98.2 78 64.1
Glyma.17G085550 Glycine max HOM05D000565 ORTHO05D003973 3.8e-19 97.8 77 66.2
CANSAT80G1249 Cannabis sativa HOM05D000565 ORTHO05D003973 6.6e-19 97.1 78 64.1
Migut.D01993 Erythranthe guttata HOM05D000565 ORTHO05D003973 6.6e-19 97.1 77 64.9
Duzib205G0694 Durio zibethinus HOM05D000565 ORTHO05D003973 1.1e-18 96.3 78 67.9
CSS0016759 Camellia sinensis var. sinensis HOM05D000565 ORTHO05D003973 1.5e-18 95.9 75 64.0
Oeu036517.1 Olea europaea HOM05D000565 ORTHO05D003973 1.9e-18 95.5 75 68.0
Ca_14268_v3 Cicer arietinum L. HOM05D000565 ORTHO05D003973 2.5e-18 95.1 77 66.2
Lalb_Chr13g0297671 Lupinus albus HOM05D000565 ORTHO05D003973 2.5e-18 95.1 70 64.3
SalBow6G5542 Salvia bowleyana HOM05D000565 ORTHO05D003973 3.3e-18 94.7 78 64.1
SalBow6G6138 Salvia bowleyana HOM05D000565 ORTHO05D003973 3.3e-18 94.7 78 64.1
VMungo1215G0021 Vigna mungo HOM05D000565 ORTHO05D003973 3.3e-18 94.7 74 67.6
Phvul.003G203966 Phaseolus vulgaris HOM05D000565 ORTHO05D003973 4.2e-18 94.4 77 64.9
CiPaw.11G021700 Carya illinoinensis HOM05D000565 ORTHO05D003973 5.5e-18 94.0 67 68.7
Lj4g0003586 Lotus japonicus HOM05D000565 ORTHO05D003973 5.5e-18 94.0 77 63.6
FvH4_5g06080 Fragaria vesca HOM05D000565 ORTHO05D003973 1.2e-17 92.8 66 68.2
FAN18G3431 Fragaria x ananassa HOM05D000565 ORTHO05D003973 1.2e-17 92.8 66 68.2
Ciclev10030994m.g Citrus clementina HOM05D000565 ORTHO05D003973 1.6e-17 92.4 78 61.5
Aqoxy5G03782 Aquilegia oxysepala HOM05D000565 ORTHO05D003973 2.8e-17 91.7 78 61.5
Lsat_1_v5_gn_5_14101 Lactuca sativa HOM05D000565 ORTHO05D003973 2.8e-17 91.7 68 64.7
Medtr4g105110 Medicago truncatula HOM05D000565 ORTHO05D003973 2.8e-17 91.7 76 63.2
Eucgr.B00228 Eucalyptus grandis HOM05D000565 ORTHO05D002686 4.7e-17 90.9 71 56.3
QL10p007175 Quercus lobata HOM05D000565 ORTHO05D003973 4.7e-17 90.9 78 65.4
Thecc.02G258600 Theobroma cacao HOM05D000565 ORTHO05D003973 1.0e-16 89.7 77 57.1
CSS0042539 Camellia sinensis var. sinensis HOM05D000565 ORTHO05D003973 1.4e-16 89.4 78 60.3
CSS0049352 Camellia sinensis var. sinensis HOM05D000565 ORTHO05D003973 1.4e-16 89.4 78 60.3
CSS0010270 Camellia sinensis var. sinensis HOM05D000565 ORTHO05D003973 1.8e-16 89.0 75 58.7
COL.COLO4_24253 Corchorus olitorius HOM05D000565 ORTHO05D003973 1.8e-16 89.0 75 57.3
QL03p058426 Quercus lobata HOM05D000565 ORTHO05D003973 1.8e-16 89.0 71 63.4
MELO3C002293.2 Cucumis melo HOM05D000565 ORTHO05D003973 2.3e-16 88.6 79 63.3
Sabra15G0106300 Salix brachista HOM05D000565 ORTHO05D003973 2.3e-16 88.6 78 59.0
Lj5P129T41 Lonicera japonica HOM05D000565 ORTHO05D003973 3.0e-16 88.2 67 65.7
Sed0009413 Sechium edule HOM05D000565 ORTHO05D003973 3.0e-16 88.2 70 67.1
Dinv38546 Davidia involucrata HOM05D000565 ORTHO05D003973 4.0e-16 87.8 63 73.0
TPR.G37548 Trifolium pratense HOM05D000565 ORTHO05D003973 4.0e-16 87.8 69 63.8
ClCG01G013440 Citrullus lanatus HOM05D000565 ORTHO05D003973 5.2e-16 87.4 77 66.2
Atru.chr9.2557 Acer truncatum HOM05D000565 ORTHO05D003973 6.8e-16 87.0 78 59.0
TAR371G0098 Trochodendron aralioides HOM05D000565 ORTHO05D003973 2.6e-15 85.1 75 60.0
CsaV3_1G008790 Cucumis sativus L. HOM05D000565 ORTHO05D003973 3.4e-15 84.7 79 60.8
Manes.13G025300 Manihot esculenta HOM05D000565 ORTHO05D003973 4.4e-15 84.3 76 56.6
Duzib251G0931 Durio zibethinus HOM05D000565 ORTHO05D003973 5.7e-15 84.0 78 55.1
Gohir.D02G159300 Gossypium hirsutum HOM05D000565 ORTHO05D003973 5.7e-15 84.0 77 55.8
AUR62008156 Chenopodium quinoa HOM05D000565 ORTHO05D003973 7.5e-15 83.6 71 54.9
MBI07_g03728_MAGBIO Magnolia biondii HOM05D000565 ORTHO05D003973 7.5e-15 83.6 78 56.4
Gohir.A03G136000 Gossypium hirsutum HOM05D000565 ORTHO05D003973 9.8e-15 83.2 77 55.8
Psat0s2493g0040 Pisum sativum HOM05D000565 ORTHO05D003973 9.8e-15 83.2 77 59.7
Potri.010G045500 Populus trichocarpa HOM05D000565 ORTHO05D003973 9.8e-15 83.2 76 56.6
ECA246G2073 Erigeron canadensis HOM05D000565 ORTHO05D003973 1.3e-14 82.8 68 57.4
MD13G1102400 Malus domestica HOM05D000565 ORTHO05D003973 1.3e-14 82.8 78 53.8
Eucgr.B03298 Eucalyptus grandis HOM05D000565 ORTHO05D003973 2.9e-14 81.6 65 61.5
Hma1.2p1_0223F.1_g094080 Hydrangea macrophylla HOM05D000565 ORTHO05D003973 2.9e-14 81.6 76 57.9
Oeu038627.5 Olea europaea HOM05D000565 ORTHO05D003973 2.9e-14 81.6 72 52.8
PSO478G0432 Papaver somniferum HOM05D000565 ORTHO05D003973 2.9e-14 81.6 78 60.3
Lalb_Chr09g0326131 Lupinus albus HOM05D000565 ORTHO05D003973 4.9e-14 80.9 66 63.6
MD16G1102800 Malus domestica HOM05D000565 ORTHO05D003973 4.9e-14 80.9 76 53.9
Sabra15G0106500 Salix brachista HOM05D000565 ORTHO05D003973 4.9e-14 80.9 76 57.9
Sc12g0005060 Simmondsia chinensis HOM05D000565 ORTHO05D003973 4.9e-14 80.9 68 52.9
Sabra10G0022900 Salix brachista HOM05D000565 ORTHO05D003973 6.3e-14 80.5 76 56.6
Prupe.1G243400 Prunus persica HOM05D000565 ORTHO05D003973 8.3e-14 80.1 76 55.3
RcHm_v2.0_Chr4g0432811 Rosa chinensis HOM05D000565 ORTHO05D003973 8.3e-14 80.1 76 56.6
AUR62028736 Chenopodium quinoa HOM05D000565 ORTHO05D003973 1.1e-13 79.7 71 53.5
Cc04_g11750 Coffea canephora HOM05D000565 ORTHO05D003973 1.4e-13 79.3 59 64.4
Gorai.005G179400 Gossypium raimondii HOM05D000565 ORTHO05D003973 1.4e-13 79.3 77 54.5
Haze_12241 Corylus avellana HOM05D000565 ORTHO05D003973 1.8e-13 79.0 73 57.5
PGR119G0072 Punica granatum HOM05D000565 ORTHO05D003973 1.8e-13 79.0 76 53.9
SalBow6G0884 Salvia bowleyana HOM05D000565 ORTHO05D003973 2.4e-13 78.6 82 50.0
HPP92_009904 Vanilla planifolia HOM05D000565 ORTHO05D003973 2.4e-13 78.6 76 55.3
Cpa.g.sc33.10 Carica papaya HOM05D000565 ORTHO05D003973 3.2e-13 78.2 74 55.4
Rhsim12G0111900 Rhododendron simsii HOM05D000565 ORTHO05D003973 4.1e-13 77.8 76 53.9
CiPaw.06G068300 Carya illinoinensis HOM05D000565 ORTHO05D003973 5.4e-13 77.4 76 55.3
Manes.12G023800 Manihot esculenta HOM05D000565 ORTHO05D003973 5.4e-13 77.4 79 51.9
Actinidia15085 Actinidia chinensis HOM05D000565 ORTHO05D003973 7.0e-13 77.0 78 52.6
HPP92_024675 Vanilla planifolia HOM05D000565 ORTHO05D003973 9.2e-13 76.6 76 53.9
Atru.chr11.2112 Acer truncatum HOM05D000565 ORTHO05D003973 2.0e-12 75.5 77 58.4
Atru.chr11.2126 Acer truncatum HOM05D000565 ORTHO05D003973 2.0e-12 75.5 77 58.4
ATR0686G178 Amborella trichopoda HOM05D000565 ORTHO05D003973 2.7e-12 75.1 70 52.9
AUR62005451 Chenopodium quinoa HOM05D000565 ORTHO05D003973 3.5e-12 74.7 78 52.6
AUR62005452 Chenopodium quinoa HOM05D000565 ORTHO05D003973 3.5e-12 74.7 78 52.6
AUR62005453 Chenopodium quinoa HOM05D000565 ORTHO05D003973 3.5e-12 74.7 78 52.6
AUR62005454 Chenopodium quinoa HOM05D000565 ORTHO05D003973 3.5e-12 74.7 78 52.6
Gorai.002G187000 Gossypium raimondii HOM05D000565 ORTHO05D003973 3.5e-12 74.7 70 50.0
Sed0002700 Sechium edule HOM05D000565 ORTHO05D003973 3.5e-12 74.7 74 56.8
vmacro16207 Vaccinium macrocarpon HOM05D000565 ORTHO05D003973 5.9e-12 73.9 77 54.5
Gohir.A01G159350 Gossypium hirsutum HOM05D000565 ORTHO05D003973 7.8e-12 73.6 70 48.6
Gohir.D01G150900 Gossypium hirsutum HOM05D000565 ORTHO05D003973 7.8e-12 73.6 70 48.6
MELO3C010689.2 Cucumis melo HOM05D000565 ORTHO05D003973 1.0e-11 73.2 75 49.3
Sabra12G0060600 Salix brachista HOM05D000565 ORTHO05D003973 1.0e-11 73.2 78 53.8
EL10Ac5g10670 Beta vulgaris HOM05D000565 ORTHO05D003973 1.3e-11 72.8 71 52.1
AUR62024290 Chenopodium quinoa HOM05D000565 ORTHO05D003973 1.3e-11 72.8 77 51.9
TAR374G0593 Trochodendron aralioides HOM05D000565 ORTHO05D003973 1.3e-11 72.8 68 60.3
ECA246G0791 Erigeron canadensis HOM05D000565 ORTHO05D003973 1.7e-11 72.4 71 52.1
FvH4_4g25480 Fragaria vesca HOM05D000565 ORTHO05D003973 1.7e-11 72.4 76 53.9
FAN07G1517 Fragaria x ananassa HOM05D000565 ORTHO05D003973 1.7e-11 72.4 76 53.9
GSVIVG01007669001 Vitis vinifera HOM05D000565 ORTHO05D002686 1.7e-11 72.4 71 59.2
ClCG08G017710 Citrullus lanatus HOM05D000565 ORTHO05D003973 3.9e-11 71.2 78 47.4
CsaV3_2G024920 Cucumis sativus L. HOM05D000565 ORTHO05D003973 3.9e-11 71.2 75 48.0
FAN22G0373 Fragaria x ananassa HOM05D000565 ORTHO05D003973 3.9e-11 71.2 76 51.3
FAN12G3603 Fragaria x ananassa HOM05D000565 ORTHO05D003973 5.0e-11 70.9 76 52.6
HanXRQChr12g0385361 Helianthus annuus HOM05D000565 ORTHO05D003973 5.0e-11 70.9 71 50.7
CAN.G7.12 Capsicum annuum HOM05D000565 ORTHO05D003973 6.6e-11 70.5 77 48.1
TWI18G0654 Tripterygium wilfordii HOM05D000565 ORTHO05D003973 6.6e-11 70.5 78 48.7
Ah.11g051310 Amaranthus hybridus HOM05D000565 ORTHO05D003973 8.6e-11 70.1 71 49.3
CANSAT01G1293 Cannabis sativa HOM05D000565 ORTHO05D003973 8.6e-11 70.1 81 46.9
Lj9P444T40 Lonicera japonica HOM05D000565 ORTHO05D003973 1.5e-10 69.3 65 55.4
VMungo1215G0180 Vigna mungo HOM05D000565 ORTHO05D003973 1.5e-10 69.3 79 51.9
HanXRQChr13g0418031 Helianthus annuus HOM05D000565 ORTHO05D003973 2.5e-10 68.6 71 49.3
Eucgr.H02502 Eucalyptus grandis HOM05D000565 ORTHO05D003973 3.3e-10 68.2 69 46.4
Nitab4.5_0007849g0020 Nicotiana tabacum HOM05D000565 ORTHO05D003973 3.3e-10 68.2 74 45.9
BcaC04g23930 Brassica carinata HOM05D000565 ORTHO05D003973 5.6e-10 67.4 63 52.4
A09p03100 Brassica napus HOM05D000565 ORTHO05D003973 5.6e-10 67.4 63 52.4
C09p03250 Brassica napus HOM05D000565 ORTHO05D003973 5.6e-10 67.4 63 52.4
BolC9t53250H Brassica oleracea HOM05D000565 ORTHO05D003973 5.6e-10 67.4 63 52.4
BraA09t35948Z Brassica rapa HOM05D000565 ORTHO05D003973 5.6e-10 67.4 63 52.4
Thhalv10003833m.g Eutrema salsugineum HOM05D000565 ORTHO05D003973 5.6e-10 67.4 63 52.4
Glyma.01G026400 Glycine max HOM05D000565 ORTHO05D003973 5.6e-10 67.4 77 51.9
Lj2g0009130 Lotus japonicus HOM05D000565 ORTHO05D003973 5.6e-10 67.4 64 53.1
CARHR147610 Cardamine hirsuta HOM05D000565 ORTHO05D003973 7.3e-10 67.0 63 52.4
SHI17214 Sapria himalayana HOM05D000565 ORTHO05D000023 7.3e-10 67.0 67 47.8
SEGI_19389 Sequoiadendron giganteum HOM05D000565 ORTHO05D003973 7.3e-10 67.0 78 50.0
Sp2g15710 Schrenkiella parvula HOM05D000565 ORTHO05D003973 9.5e-10 66.6 63 52.4
Lalb_Chr16g0381961 Lupinus albus HOM05D000565 ORTHO05D003973 1.2e-09 66.2 67 58.2
Medtr5g033190 Medicago truncatula HOM05D000565 ORTHO05D003973 1.2e-09 66.2 61 55.7
GSVIVG01004080001 Vitis vinifera HOM05D000565 ORTHO05D003973 1.2e-09 66.2 71 49.3
Nitab4.5_0000370g0090 Nicotiana tabacum HOM05D000565 ORTHO05D003973 1.6e-09 65.9 77 45.5
Nitab4.5_0004521g0020 Nicotiana tabacum HOM05D000565 ORTHO05D003973 1.6e-09 65.9 77 45.5
Phvul.002G150500 Phaseolus vulgaris HOM05D000565 ORTHO05D003973 1.6e-09 65.9 77 50.6
Glyma.02G038400 Glycine max HOM05D000565 ORTHO05D003973 2.8e-09 65.1 77 51.9
Carub.0005s0459 Capsella rubella HOM05D000565 ORTHO05D003973 3.6e-09 64.7 63 50.8
Lsat_1_v5_gn_4_4460 Lactuca sativa HOM05D000565 ORTHO05D003973 3.6e-09 64.7 68 47.1
EL10Ac6g13799 Beta vulgaris HOM05D000565 ORTHO05D003973 4.7e-09 64.3 71 46.5
ECA234G4577 Erigeron canadensis HOM05D000565 ORTHO05D003973 4.7e-09 64.3 71 47.9
Aa31LG2G5940 Aethionema arabicum HOM05D000565 ORTHO05D003973 6.2e-09 63.9 63 50.8
Migut.L01485 Erythranthe guttata HOM05D000565 ORTHO05D003973 6.2e-09 63.9 69 47.8
AL5G15390 Arabidopsis lyrata HOM05D000565 ORTHO05D003973 8.0e-09 63.5 63 50.8
MSTRG.2421 Avicennia marina HOM05D000565 ORTHO05D003973 8.0e-09 63.5 68 48.5
AT3G26600 Arabidopsis thaliana HOM05D000565 ORTHO05D003973 1.0e-08 63.2 63 50.8
HanXRQChr17g0539801 Helianthus annuus HOM05D000565 ORTHO05D003973 1.0e-08 63.2 68 47.1
Ca_04575_v3 Cicer arietinum L. HOM05D000565 ORTHO05D003973 1.4e-08 62.8 59 54.2
SalBow2G0029 Salvia bowleyana HOM05D000565 ORTHO05D003973 1.8e-08 62.4 68 44.1
Psat2g092640 Pisum sativum HOM05D000565 ORTHO05D003973 2.3e-08 62.0 72 50.0
Oeu059909.1 Olea europaea HOM05D000565 ORTHO05D003973 3.1e-08 61.6 73 46.6
TPR.G17606 Trifolium pratense HOM05D000565 ORTHO05D003973 3.1e-08 61.6 59 55.9
unitig_744.g24292 Utricularia gibba HOM05D000565 ORTHO05D003973 6.8e-08 60.5 61 45.9
MSTRG.13354 Avicennia marina HOM05D000565 ORTHO05D003973 1.2e-07 59.7 68 44.1
Oeu028588.1 Olea europaea HOM05D000565 ORTHO05D003973 1.2e-07 59.7 75 45.3
Migut.E00198 Erythranthe guttata HOM05D000565 ORTHO05D003973 2.6e-07 58.5 70 41.4
PSO675G2382 Papaver somniferum HOM05D000565 ORTHO05D003973 2.6e-07 58.5 66 50.0
HanXRQChr17g0539781 Helianthus annuus HOM05D000565 ORTHO05D003973 7.5e-07 57.0 68 42.6
PSO675G1561 Papaver somniferum HOM05D000565 ORTHO05D003973 1.3e-06 56.2 74 45.9
SGA_v2.0_scaffold63G21731 Striga asiatica HOM05D000565 ORTHO05D003973 1.3e-06 56.2 68 44.1
THA.LOC104824003 Tarenaya hassleriana HOM05D000565 ORTHO05D003973 2.9e-06 55.1 64 51.6
Actinidia15086 Actinidia chinensis HOM05D000565 ORTHO05D003973 8.3e-06 53.5 58 56.9


User provided reference genes

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