Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 2.3e-191 672.2 368 100.0
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 2.1e-184 649.0 370 96.8
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 9.5e-177 623.6 370 94.6
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 9.0e-151 537.3 379 81.8
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 1.7e-146 523.1 380 81.6
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 1.4e-140 503.4 381 81.1
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 5.5e-76 288.9 388 49.0
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 8.0e-67 258.5 386 53.9
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 8.0e-67 258.5 384 52.1
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 2.3e-66 256.9 401 49.6
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 4.0e-66 256.1 402 49.5
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 7.5e-65 251.9 369 52.0
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 3.7e-64 249.6 395 50.6
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 2.0e-62 243.8 427 46.6
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 5.0e-61 239.2 382 48.4
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 8.6e-61 238.4 382 48.2
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.5e-60 237.7 371 48.0
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.3e-60 236.1 385 48.6
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 5.6e-60 235.7 384 49.5
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.6e-59 234.2 382 47.6
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 2.3e-58 230.3 372 48.4
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 2.2e-56 223.8 424 44.3
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 4.9e-56 222.6 386 43.5
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 5.4e-55 219.2 383 42.3
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 2.1e-54 217.2 412 44.2
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 4.6e-54 216.1 379 43.8
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 7.8e-54 215.3 391 43.0
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 2.3e-53 213.8 358 41.9
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 3.0e-53 213.4 396 41.2
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 3.9e-53 213.0 389 42.4
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 4.3e-52 209.5 347 44.7
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.3e-52 209.5 384 46.1
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 7.3e-52 208.8 364 48.1
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.6e-51 207.6 376 50.3
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 8.1e-51 205.3 403 39.2
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.1e-50 204.9 390 42.3
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 4.0e-50 203.0 357 42.0
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 1.5e-49 201.1 379 40.9
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.0e-49 200.7 404 39.4
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 4.4e-49 199.5 361 41.3
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 1.7e-48 197.6 379 41.2
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 1.7e-48 197.6 366 42.1
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.9e-47 194.1 403 38.7
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 1.9e-47 194.1 355 40.3
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 1.2e-46 191.4 391 37.9
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 2.1e-46 190.7 403 38.2
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 8.6e-45 185.3 404 40.8
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.5e-44 183.7 407 38.1
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 4.3e-44 183.0 374 40.4
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 1.5e-41 174.5 216 50.9
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 7.1e-39 165.6 387 40.8
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 9.2e-39 165.2 343 38.5
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 1.0e-37 161.8 374 36.4
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 1.5e-36 157.9 366 36.1
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 6.2e-35 152.5 392 36.0
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 2.2e-32 144.1 355 34.1
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 5.4e-31 139.4 237 50.2
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 4.8e-27 126.3 285 37.9
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 1.8e-26 124.4 339 32.7
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 1.3e-24 118.2 140 52.9
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 1.1e-23 115.2 370 35.1
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 2.3e-21 107.5 188 47.9
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.6e-19 101.3 244 35.7
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 4.0e-18 96.7 191 48.7
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 3.3e-12 77.0 138 41.3
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 2.4e-10 70.9 341 28.4
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 2.4e-10 70.9 351 31.6
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 9.0e-10 68.9 289 29.4
Actinidia36758 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.5e-07 60.8 76 48.7


User provided reference genes

Program Settings