Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g098545.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 2.2e-164 582.4 337 100.0
Solyc03g098535.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 4.3e-160 568.2 337 98.2
Sopen03g029260 Solanum pennellii HOM05D010102 ORTHO05D012244 8.2e-151 537.3 337 89.3
Solyc03g098540.2 Solanum lycopersicum HOM05D010102 ORTHO05D012244 4.6e-101 372.1 348 68.7
Sopen03g029270 Solanum pennellii HOM05D010102 ORTHO05D012244 3.2e-94 349.4 333 68.8
Solyc03g098530.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 1.5e-91 340.5 326 58.0
Sopen03g029250 Solanum pennellii HOM05D010102 ORTHO05D012244 9.5e-91 337.8 311 60.1
Solyc03g098560.2 Solanum lycopersicum HOM05D010102 ORTHO05D012244 2.5e-35 153.7 159 56.6
Nitab4.5_0008408g0020 Nicotiana tabacum HOM05D010102 ORTHO05D012244 1.1e-33 148.3 324 34.0
PGSC0003DMG400010179 Solanum tuberosum HOM05D010102 ORTHO05D012244 1.0e-31 141.7 167 53.3
Nitab4.5_0003040g0140 Nicotiana tabacum HOM05D010102 ORTHO05D012244 2.3e-28 130.6 320 33.8
Nitab4.5_0000782g0120 Nicotiana tabacum HOM05D010102 ORTHO05D012244 4.1e-25 119.8 313 34.8
Sopen03g029240 Solanum pennellii HOM05D010102 ORTHO05D012244 4.0e-20 103.2 92 50.0
Solyc03g098520.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 1.1e-19 101.7 118 50.0
Nitab4.5_0006900g0020 Nicotiana tabacum HOM05D010102 ORTHO05D012244 4.2e-14 83.2 113 41.6
Nitab4.5_0000068g0060 Nicotiana tabacum HOM05D010102 ORTHO05D012244 2.7e-13 80.5 108 40.7
Nitab4.5_0003040g0170 Nicotiana tabacum HOM05D010102 ORTHO05D012244 7.5e-11 72.4 69 50.7
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-10 70.5 117 34.2
Sopen12g010870 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-10 69.7 117 34.2
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.3e-10 68.9 118 33.9
Atru.chr3.1971 Acer truncatum HOM05D000004 ORTHO05D000002 4.1e-09 66.6 97 32.0
Atru.chr3.1984 Acer truncatum HOM05D000004 ORTHO05D000002 4.1e-09 66.6 97 32.0
Sopen00g010850 Solanum pennellii HOM05D010102 ORTHO05D012244 4.1e-09 66.6 123 40.7
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 4.5e-08 63.2 130 36.2
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.5e-08 63.2 157 27.4
Ah.07g201970 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.9e-08 62.8 98 38.8
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.7e-07 61.2 129 27.1
Ah.15g098410 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.0e-07 59.7 142 31.0
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 5.0e-07 59.7 101 34.7
CAN.G370.89 Capsicum annuum HOM05D000004 ORTHO05D000002 6.5e-07 59.3 88 37.5
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-07 59.3 84 41.7
Nn2g14341 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.5e-07 58.9 172 25.0
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-06 58.2 84 36.9
Hma1.2p1_0487F.1_g163610 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.9e-06 57.8 154 27.3
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 2.5e-06 57.4 107 35.5
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.5e-06 57.4 100 35.0
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 3.2e-06 57.0 218 25.2
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 4.2e-06 56.6 99 33.3
CAN.G1408.1 Capsicum annuum HOM05D000004 ORTHO05D000002 5.5e-06 56.2 131 29.0
AUR62037042 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.5e-06 56.2 79 38.0
Sopen07g020790 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-06 56.2 77 35.1
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.2e-06 55.8 166 27.1
COL.COLO4_23642 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.5e-06 55.5 87 35.6


User provided reference genes

Program Settings