Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g098490.1 Solanum lycopersicum HOM05D010719 ORTHO05D012345 8.1e-183 643.7 338 100.0
PGSC0003DMG400010154 Solanum tuberosum HOM05D010719 ORTHO05D012345 6.5e-140 501.1 343 83.4
Sopen03g029230 Solanum pennellii HOM05D010719 ORTHO05D012345 8.6e-124 447.6 242 96.3
CAN.G929.28 Capsicum annuum HOM05D010719 ORTHO05D012345 1.5e-104 383.6 351 66.4
Nitab4.5_0006956g0010 Nicotiana tabacum HOM05D010719 ORTHO05D012345 5.1e-100 368.6 372 63.2
Peaxi162Scf00171g10029 Petunia axillaris HOM05D010719 ORTHO05D012345 1.7e-87 327.0 354 57.3
Nitab4.5_0000782g0170 Nicotiana tabacum HOM05D010719 ORTHO05D012345 4.9e-79 298.9 313 62.0
Peaxi162Scf00171g00031 Petunia axillaris HOM05D010719 ORTHO05D012345 9.0e-73 278.1 355 52.7
Nitab4.5_0004612g0020 Nicotiana tabacum HOM05D010719 ORTHO05D012345 1.0e-60 238.0 352 49.4
CAN.G929.29 Capsicum annuum HOM05D010719 ORTHO05D012345 5.3e-57 225.7 408 43.1
Solyc03g098480.1 Solanum lycopersicum HOM05D010719 ORTHO05D012345 1.5e-56 224.2 376 45.5
Sopen03g029220 Solanum pennellii HOM05D010719 ORTHO05D012345 3.6e-53 213.0 368 44.8
Nitab4.5_0000782g0220 Nicotiana tabacum HOM05D010719 ORTHO05D012345 2.1e-45 187.2 313 44.1
PGSC0003DMG400010155 Solanum tuberosum HOM05D010719 ORTHO05D012345 8.8e-44 181.8 441 36.7
CAN.G1635.18 Capsicum annuum HOM05D010719 ORTHO05D012345 1.1e-38 164.9 121 72.7
Oeu034432.1 Olea europaea HOM05D010719 ORTHO05D012345 3.8e-31 139.8 353 36.3
Oeu016050.1 Olea europaea HOM05D001640 ORTHO05D012345 6.5e-31 139.0 348 35.1
MBI03_g13831_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 2.0e-24 117.5 327 34.3
Cc04_g08580 Coffea canephora HOM05D001640 ORTHO05D012345 1.1e-17 95.1 440 29.1
TAR629G3218 Trochodendron aralioides HOM05D001640 ORTHO05D001612 2.4e-17 94.0 355 31.3
SGA_v2.0_scaffold90G27760 Striga asiatica HOM05D010719 ORTHO05D012345 1.3e-15 88.2 335 30.1
Migut.G00597 Erythranthe guttata HOM05D010719 ORTHO05D012345 1.7e-15 87.8 352 28.4
Migut.D02062 Erythranthe guttata HOM05D001640 ORTHO05D001612 5.0e-15 86.3 331 31.4
Lj5P167T28 Lonicera japonica HOM05D010719 ORTHO05D012345 8.6e-15 85.5 233 32.6
SalBow5G1491 Salvia bowleyana HOM05D001640 ORTHO05D012345 1.9e-14 84.3 181 35.4
Eucgr.K02310 Eucalyptus grandis HOM05D001640 ORTHO05D001612 4.2e-14 83.2 346 28.3
CiPaw.15G093800 Carya illinoinensis HOM05D001640 ORTHO05D001612 1.6e-13 81.3 330 30.6
Ciclev10021576m.g Citrus clementina HOM05D001640 ORTHO05D001612 2.8e-13 80.5 327 31.5
Oeu023548.1 Olea europaea HOM05D010719 ORTHO05D012345 2.3e-12 77.4 169 33.7
Manes.03G067600 Manihot esculenta HOM05D001640 ORTHO05D001612 5.2e-12 76.3 327 30.9
TPR.G19885 Trifolium pratense HOM05D001640 ORTHO05D001612 5.2e-12 76.3 344 27.0
PSO782G0998 Papaver somniferum HOM05D001640 ORTHO05D001612 6.8e-12 75.9 346 27.2
Cfa017826 Carpinus fangiana HOM05D001640 ORTHO05D001612 8.9e-12 75.5 343 28.9
Lalb_Chr14g0370311 Lupinus albus HOM05D001640 ORTHO05D001612 8.9e-12 75.5 121 46.3
MD06G1238700 Malus domestica HOM05D001640 ORTHO05D001612 1.2e-11 75.1 359 29.0
FvH4_5g18290 Fragaria vesca HOM05D001640 ORTHO05D001612 2.0e-11 74.3 358 27.4
TAR371G1285 Trochodendron aralioides HOM05D001640 ORTHO05D001612 2.0e-11 74.3 340 28.2
Haze_18384 Corylus avellana HOM05D001640 ORTHO05D001612 2.6e-11 73.9 337 29.1
arahy.Tifrunner.gnm1.ann1.DQYB4L Arachis hypogaea HOM05D001640 ORTHO05D001612 3.4e-11 73.6 330 27.3
CANSAT64G1354 Cannabis sativa HOM05D001640 ORTHO05D001612 3.4e-11 73.6 327 27.2
Cpa.g.sc111.33 Carica papaya HOM05D001640 ORTHO05D001612 3.4e-11 73.6 153 38.6
DCAR_014747 Daucus carota HOM05D001640 ORTHO05D001612 4.4e-11 73.2 376 28.2
FAN18G3015 Fragaria x ananassa HOM05D001640 ORTHO05D001612 4.4e-11 73.2 358 27.1
PSO063G6251 Papaver somniferum HOM05D001640 ORTHO05D001612 4.4e-11 73.2 346 26.3
VMungo0464G0664 Vigna mungo HOM05D001640 ORTHO05D001612 4.4e-11 73.2 339 28.3
Phvul.004G141400 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 5.7e-11 72.8 333 29.4
Medtr6g080650 Medicago truncatula HOM05D001640 ORTHO05D001612 9.8e-11 72.0 362 29.8
MBI06_g27494_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 1.3e-10 71.6 336 28.0
RcHm_v2.0_Chr7g0177291 Rosa chinensis HOM05D001640 ORTHO05D001612 2.2e-10 70.9 361 26.9
DCAR_023250 Daucus carota HOM05D001640 ORTHO05D001612 4.9e-10 69.7 126 37.3
Glyma.16G215800 Glycine max HOM05D001640 ORTHO05D001612 8.3e-10 68.9 334 29.6
Lalb_Chr24g0398511 Lupinus albus HOM05D001640 ORTHO05D001612 1.1e-09 68.6 120 41.7
Sabra12G0025500 Salix brachista HOM05D001640 ORTHO05D001612 1.1e-09 68.6 319 28.8
Glyma.09G165900 Glycine max HOM05D001640 ORTHO05D001612 1.4e-09 68.2 336 28.6
Potri.015G028700 Populus trichocarpa HOM05D001640 ORTHO05D001612 1.4e-09 68.2 323 29.1
Manes.16G063300 Manihot esculenta HOM05D001640 ORTHO05D001612 2.4e-09 67.4 115 40.9
arahy.Tifrunner.gnm1.ann1.WL96AD Arachis hypogaea HOM05D001640 ORTHO05D001612 3.1e-09 67.0 331 27.2
TPR.G2580 Trifolium pratense HOM05D001640 ORTHO05D001612 3.1e-09 67.0 120 43.3
Psat1g121240 Pisum sativum HOM05D001640 ORTHO05D001612 1.2e-08 65.1 348 27.0
Sabra15G0023900 Salix brachista HOM05D001640 ORTHO05D001612 1.2e-08 65.1 322 27.6
Dinv06414 Davidia involucrata HOM05D001640 ORTHO05D001612 2.0e-08 64.3 98 42.9
MD14G1244900 Malus domestica HOM05D001640 ORTHO05D001612 2.0e-08 64.3 392 27.0
Lj2g0021861 Lotus japonicus HOM05D001640 ORTHO05D001612 1.3e-07 61.6 130 42.3
Lalb_Chr22g0353911 Lupinus albus HOM05D001640 ORTHO05D001612 2.3e-07 60.8 116 42.2
Rhsim03G0265500 Rhododendron simsii HOM05D001640 ORTHO05D001612 6.6e-07 59.3 141 36.9
Medtr6g080600 Medicago truncatula HOM05D001640 ORTHO05D001612 1.1e-06 58.5 337 26.1
Nn4g25128 Nelumbo nucifera HOM05D001640 ORTHO05D001612 2.5e-06 57.4 347 26.5
TWI15G0707 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 4.3e-06 56.6 316 25.0
Zm00001eb106950 Zea mays HOM05D001640 ORTHO05D001612 5.6e-06 56.2 124 36.3


User provided reference genes

Program Settings