Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 1.0e-82 310.1 161 100.0
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 4.3e-81 304.7 161 98.1
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 6.4e-77 290.8 161 93.8
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 6.6e-66 254.2 157 82.8
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.8e-63 246.1 156 81.4
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 2.4e-63 245.7 156 80.8
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 2.6e-62 242.3 163 82.2
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 5.3e-39 164.9 161 59.0
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 1.2e-38 163.7 182 57.7
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 2.6e-38 162.5 116 73.3
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 5.8e-38 161.4 108 79.6
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 7.6e-38 161.0 169 59.8
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 4.9e-37 158.3 164 56.1
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 6.5e-37 157.9 105 77.1
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 8.4e-37 157.5 159 58.5
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 8.4e-37 157.5 170 54.7
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.1e-36 157.1 166 55.4
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-36 157.1 101 79.2
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.1e-36 157.1 101 79.2
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.4e-36 156.8 102 77.5
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.9e-36 156.4 169 55.0
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.9e-36 156.4 105 76.2
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.9e-36 156.4 105 76.2
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 1.9e-36 156.4 160 55.6
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 2.5e-36 156.0 102 77.5
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 3.2e-36 155.6 97 81.4
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 5.5e-36 154.8 97 80.4
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 5.5e-36 154.8 105 77.1
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 7.1e-36 154.5 100 76.0
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 7.1e-36 154.5 110 71.8
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 7.1e-36 154.5 110 71.8
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 9.3e-36 154.1 103 75.7
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 1.2e-35 153.7 98 80.6
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.2e-35 153.7 133 62.4
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.2e-35 153.7 111 72.1
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 2.7e-35 152.5 167 56.9
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 3.5e-35 152.1 102 74.5
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 6.0e-35 151.4 163 55.2
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 1.0e-34 150.6 98 77.6
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.0e-34 150.6 117 69.2
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.0e-34 150.6 104 74.0
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 2.3e-34 149.4 104 76.0
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 2.3e-34 149.4 105 73.3
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 3.0e-34 149.1 98 77.6
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 3.0e-34 149.1 97 77.3
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 3.9e-34 148.7 158 55.7
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 6.7e-34 147.9 173 53.8
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 8.7e-34 147.5 166 56.6
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 8.7e-34 147.5 111 73.0
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 8.7e-34 147.5 135 62.2
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.5e-33 146.7 105 71.4
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.5e-33 146.7 101 73.3
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.5e-33 146.7 101 73.3
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 1.9e-33 146.4 103 74.8
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 1.9e-33 146.4 97 77.3
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 2.5e-33 146.0 98 75.5
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 4.3e-33 145.2 94 77.7
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 5.7e-33 144.8 159 54.1
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.3e-32 143.7 109 68.8
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.3e-32 143.7 180 51.7
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 1.3e-32 143.7 162 53.1
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 1.6e-32 143.3 121 64.5
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 2.2e-32 142.9 174 50.6
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 3.7e-32 142.1 163 54.6
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 4.8e-32 141.7 165 53.9
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 1.1e-31 140.6 97 73.2
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 2.4e-31 139.4 100 73.0
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 3.1e-31 139.0 85 78.8
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 3.1e-31 139.0 121 65.3
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 9.0e-31 137.5 95 72.6
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.5e-30 136.7 81 85.2
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 2.0e-30 136.3 104 68.3
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 3.4e-30 135.6 95 71.6
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 4.5e-30 135.2 99 69.7
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 4.5e-30 135.2 102 69.6
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 5.9e-30 134.8 87 75.9
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 5.9e-30 134.8 89 76.4
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 7.6e-30 134.4 103 68.0
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 7.6e-30 134.4 153 54.9
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 1.0e-29 134.0 95 70.5
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 1.0e-29 134.0 95 71.6
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 1.0e-29 134.0 95 71.6
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 1.0e-29 134.0 95 71.6
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.7e-29 133.3 83 78.3
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 1.7e-29 133.3 95 70.5
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.7e-29 133.3 141 54.6
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.7e-29 133.3 95 70.5
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.7e-29 133.3 141 54.6
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 1.7e-29 133.3 95 70.5
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.7e-29 133.3 95 70.5
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 2.2e-29 132.9 95 70.5
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 2.9e-29 132.5 95 70.5
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 5.0e-29 131.7 95 70.5
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 5.0e-29 131.7 95 70.5
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 6.5e-29 131.3 101 69.3
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 8.5e-29 131.0 95 69.5
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 2.5e-28 129.4 95 72.6
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 3.2e-28 129.0 93 68.8
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 3.2e-28 129.0 117 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 5.5e-28 128.3 119 58.8
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 5.5e-28 128.3 77 81.8
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.2e-28 127.9 99 67.7
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.1e-27 126.3 81 79.0
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 7.9e-27 124.4 74 82.4
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.7e-24 116.7 84 66.7
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 1.5e-22 110.2 117 54.7
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 5.0e-21 105.1 102 55.9
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 1.9e-20 103.2 100 52.0
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 8.8e-18 94.4 79 51.9
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 3.3e-17 92.4 88 56.8
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.7e-16 90.1 183 36.6
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.7e-16 90.1 183 36.6
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 1.4e-15 87.0 49 83.7
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 2.4e-15 86.3 48 87.5
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 1.1e-12 77.4 90 52.2
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 4.7e-11 72.0 121 41.3
AL3G12640 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 1.8e-07 60.1 73 53.4
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 9.1e-07 57.8 50 62.0
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 2.0e-06 56.6 44 65.9
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 2.6e-06 56.2 50 60.0


User provided reference genes

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