Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 3.0e-246 854.7 429 100.0
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 4.6e-239 830.9 429 96.7
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 2.5e-221 771.9 429 89.3
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 3.3e-221 771.5 429 89.3
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 2.7e-207 725.3 431 86.1
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 1.4e-171 606.7 409 74.6
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 1.2e-170 603.6 429 74.4
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 7.2e-168 594.3 426 70.9
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.6e-167 593.2 418 71.3
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.1e-167 592.8 426 70.7
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 4.8e-164 581.6 438 68.5
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 1.8e-163 579.7 428 68.2
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 2.0e-162 576.2 394 71.8
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 7.7e-162 574.3 377 72.4
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.7e-161 573.2 393 72.3
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 2.2e-161 572.8 412 68.0
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 9.4e-160 567.4 282 99.3
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 1.2e-159 567.0 379 72.8
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 4.7e-159 565.1 394 70.1
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 5.2e-158 561.6 377 73.2
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 6.7e-158 561.2 426 66.4
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 8.8e-158 560.8 422 66.6
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 1.2e-157 560.5 393 70.2
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 2.6e-157 559.3 382 71.7
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 3.3e-157 558.9 382 71.7
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 5.7e-157 558.1 421 67.5
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 9.7e-157 557.4 406 69.0
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 2.2e-156 556.2 384 71.6
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 2.2e-156 556.2 382 71.2
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 3.7e-156 555.4 394 70.1
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 1.4e-155 553.5 393 69.5
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 1.8e-155 553.1 420 66.0
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 2.4e-155 552.7 404 69.1
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 3.1e-155 552.4 374 73.5
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 1.6e-154 550.1 368 72.3
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 7.7e-154 547.7 424 64.9
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 1.0e-153 547.4 372 71.5
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 2.2e-153 546.2 376 72.3
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 2.2e-153 546.2 397 69.3
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 6.5e-153 544.7 407 66.3
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 7.2e-152 541.2 403 68.5
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 3.6e-151 538.9 399 69.2
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 3.0e-150 535.8 376 69.9
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 2.0e-149 533.1 371 69.8
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 5.7e-149 531.6 369 69.4
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 1.3e-148 530.4 383 67.9
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 6.3e-148 528.1 373 68.6
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 8.3e-148 527.7 376 68.4
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.8e-147 526.6 371 69.0
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 5.4e-147 525.0 415 65.5
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.2e-146 523.9 370 69.5
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 2.0e-146 523.1 375 68.5
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 2.7e-146 522.7 415 65.5
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.5e-146 521.9 382 67.8
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 5.9e-146 521.5 397 67.3
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 5.9e-146 521.5 370 68.9
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 2.3e-145 519.6 370 69.2
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 2.9e-145 519.2 427 64.4
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 2.5e-144 516.2 419 64.9
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 9.5e-144 514.2 370 67.6
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 9.5e-144 514.2 374 67.6
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 1.6e-143 513.5 428 61.4
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 2.1e-143 513.1 408 65.7
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 3.6e-143 512.3 427 63.7
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 6.1e-143 511.5 427 63.7
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 6.1e-143 511.5 427 63.7
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 1.0e-142 510.8 388 68.3
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 3.7e-140 502.3 419 64.0
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 8.3e-140 501.1 370 70.3
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 5.4e-139 498.4 346 69.9
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.6e-138 496.9 393 65.6
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 4.5e-138 495.4 379 64.4
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 2.9e-137 492.7 375 65.1
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.9e-136 490.0 373 65.1
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 4.3e-136 488.8 367 67.0
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 5.6e-136 488.4 369 66.4
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 7.3e-136 488.0 371 65.5
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 9.5e-136 487.6 321 73.2
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 1.6e-135 486.9 379 64.4
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 2.1e-135 486.5 394 64.2
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 6.1e-135 485.0 399 63.7
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 8.3e-132 474.6 372 64.0
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 4.6e-130 468.8 335 69.3
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 1.1e-128 464.2 358 67.3
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 1.4e-126 457.2 450 55.6
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 6.4e-124 448.4 422 55.5
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 2.3e-118 429.9 278 74.1
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 6.8e-118 428.3 353 65.2
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 2.6e-117 426.4 370 61.9
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 2.6e-117 426.4 296 71.3
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 8.9e-110 401.4 319 65.8
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 9.2e-107 391.3 270 68.9
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 8.7e-105 384.8 425 48.7
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 2.8e-103 379.8 428 48.4
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 4.8e-103 379.0 280 67.9
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 6.2e-103 378.6 393 54.5
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 6.6e-97 358.6 325 59.1
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 6.6e-97 358.6 325 57.8
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 6.7e-73 278.9 372 43.0
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 7.0e-54 215.7 438 36.3
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 2.8e-47 193.7 133 71.4
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 9.4e-43 178.7 123 68.3
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.8e-38 164.5 106 71.7
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 4.1e-38 163.3 257 38.5
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 6.6e-28 129.4 82 76.8
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 1.0e-25 122.1 72 77.8
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.0e-17 95.5 55 80.0
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 8.9e-17 92.4 70 55.7
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 9.8e-16 89.0 51 74.5
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 1.9e-11 74.7 282 26.2
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 1.6e-10 71.6 360 25.3
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 2.8e-10 70.9 96 39.6
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 1.4e-09 68.6 394 23.9
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 3.1e-09 67.4 259 26.3
HanXRQChr12g0364801 Helianthus annuus HOM05D002406 ORTHO05D007964 3.1e-09 67.4 320 25.3
COL.COLO4_07869 Corchorus olitorius HOM05D002406 ORTHO05D007964 5.2e-09 66.6 334 25.7
Duzib251G0875 Durio zibethinus HOM05D002406 ORTHO05D007964 5.2e-09 66.6 270 27.0
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 8.9e-09 65.9 335 25.1
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 1.2e-08 65.5 261 26.8
Nn4g23734 Nelumbo nucifera HOM05D002406 ORTHO05D007964 1.2e-08 65.5 316 24.4
SGA_v2.0_scaffold14G06823 Striga asiatica HOM05D002406 ORTHO05D007964 1.2e-08 65.5 261 27.2
ATR0681G159 Amborella trichopoda HOM05D002406 ORTHO05D007964 2.0e-08 64.7 317 24.3
Glyma.02G100000 Glycine max HOM05D002406 ORTHO05D007964 2.6e-08 64.3 269 25.3
MBI13_g34060_MAGBIO Magnolia biondii HOM05D002406 ORTHO05D007964 2.6e-08 64.3 262 26.7
MELO3C002949.2 Cucumis melo HOM05D002406 ORTHO05D007964 5.8e-08 63.2 261 26.1
PGR119G0491 Punica granatum HOM05D002406 ORTHO05D007964 5.8e-08 63.2 335 25.7
TAR371G0458 Trochodendron aralioides HOM05D002406 ORTHO05D007964 5.8e-08 63.2 260 27.3
ClCG03G009900 Citrullus lanatus HOM05D002406 ORTHO05D007964 7.5e-08 62.8 261 26.1
Oeu022120.1 Olea europaea HOM05D002406 ORTHO05D007964 7.5e-08 62.8 335 25.4
TAR629G2259 Trochodendron aralioides HOM05D002406 ORTHO05D007964 7.5e-08 62.8 260 27.7
Atru.chr11.1356 Acer truncatum HOM05D002406 ORTHO05D007964 1.3e-07 62.0 261 27.2
Eucgr.G02347 Eucalyptus grandis HOM05D002406 ORTHO05D007964 1.3e-07 62.0 261 27.6
Glyma.01G087900 Glycine max HOM05D002406 ORTHO05D007964 1.7e-07 61.6 269 24.5
Lsat_1_v5_gn_8_38401 Lactuca sativa HOM05D002406 ORTHO05D007964 1.7e-07 61.6 262 27.1
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 2.2e-07 61.2 257 24.5
EL10Ac6g14494 Beta vulgaris HOM05D002406 ORTHO05D007964 2.9e-07 60.8 262 26.0
QL01p045302 Quercus lobata HOM05D002406 ORTHO05D007964 2.9e-07 60.8 271 26.9
GSVIVG01011952001 Vitis vinifera HOM05D002406 ORTHO05D007964 2.9e-07 60.8 318 24.2
Hund25103 Selenicereus undatus HOM05D002406 ORTHO05D007964 3.7e-07 60.5 254 24.8
TWI31G1069 Tripterygium wilfordii HOM05D002406 ORTHO05D007964 3.7e-07 60.5 276 25.0
CSS0033832 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 6.4e-07 59.7 336 24.1
Ciclev10031094m.g Citrus clementina HOM05D002406 ORTHO05D007964 6.4e-07 59.7 262 26.3
Migut.K01266 Erythranthe guttata HOM05D002406 ORTHO05D007964 6.4e-07 59.7 263 25.9
Gorai.008G183200 Gossypium raimondii HOM05D002406 ORTHO05D007964 6.4e-07 59.7 270 25.9
Lalb_Chr04g0254921 Lupinus albus HOM05D002406 ORTHO05D007964 8.3e-07 59.3 339 25.4
HPP92_009835 Vanilla planifolia HOM05D002406 ORTHO05D007964 8.3e-07 59.3 334 24.0
Lj3A1020T56 Lonicera japonica HOM05D002406 ORTHO05D007964 1.1e-06 58.9 271 26.2
Gohir.D12G170600 Gossypium hirsutum HOM05D002406 ORTHO05D007964 1.4e-06 58.5 270 25.9
Thecc.02G360900 Theobroma cacao HOM05D002406 ORTHO05D007964 1.4e-06 58.5 270 25.2
ECA233G4417 Erigeron canadensis HOM05D002406 ORTHO05D007964 1.9e-06 58.2 262 26.0
Sc04g0006710 Simmondsia chinensis HOM05D002406 ORTHO05D007964 1.9e-06 58.2 335 24.8
CANSAT64G2221 Cannabis sativa HOM05D002406 ORTHO05D007964 3.2e-06 57.4 268 25.4
THA.LOC104808195 Tarenaya hassleriana HOM05D002406 ORTHO05D007964 3.2e-06 57.4 256 26.2
Lj2g0019756 Lotus japonicus HOM05D002406 ORTHO05D007964 4.1e-06 57.0 263 25.9
Rhsim09G0111900 Rhododendron simsii HOM05D002406 ORTHO05D007964 4.1e-06 57.0 260 26.2
Aqoxy3G03911 Aquilegia oxysepala HOM05D002406 ORTHO05D007964 7.1e-06 56.2 260 26.5
AUR62002921 Chenopodium quinoa HOM05D002406 ORTHO05D007964 7.1e-06 56.2 257 24.9
Ca_05088_v3 Cicer arietinum L. HOM05D002406 ORTHO05D007964 7.1e-06 56.2 263 25.9
Haze_17442 Corylus avellana HOM05D002406 ORTHO05D007964 7.1e-06 56.2 260 26.5
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 7.1e-06 56.2 254 24.0
Cc11_g10600 Coffea canephora HOM05D002406 ORTHO05D007964 9.2e-06 55.8 271 24.4
PSO063G1488 Papaver somniferum HOM05D002406 ORTHO05D007964 9.2e-06 55.8 261 25.7
PSO782G1356 Papaver somniferum HOM05D002406 ORTHO05D007964 9.2e-06 55.8 261 25.7
vmacro06524 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 9.2e-06 55.8 33 78.8


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