Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 5.9e-94 347.4 165 100.0
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 6.1e-91 337.4 163 97.5
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 5.2e-90 334.3 163 96.3
Peaxi162Scf01013g00008 Petunia axillaris HOM05D008744 ORTHO05D010647 7.8e-54 214.2 155 66.5
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 6.8e-50 201.1 154 60.4
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 8.9e-50 200.7 160 61.9
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 6.2e-43 177.9 110 76.4
Nitab4.5_0000078g0430 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.4e-39 166.8 147 56.5
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 3.5e-38 162.2 137 55.5
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 3.0e-37 159.1 137 54.0
PGSC0003DMG400013382 Solanum tuberosum HOM05D008744 ORTHO05D010647 5.1e-37 158.3 156 54.5
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 4.3e-36 155.2 139 52.5
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 4.3e-36 155.2 139 52.5
Nitab4.5_0005672g0020 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.4e-34 149.4 173 44.5
Solyc03g005110.3 Solanum lycopersicum HOM05D008744 ORTHO05D010647 7.6e-33 144.4 156 50.0
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-31 140.6 141 53.2
Sopen03g001120 Solanum pennellii HOM05D008744 ORTHO05D010647 3.2e-31 139.0 156 49.4
Nitab4.5_0014775g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 5.6e-28 128.3 108 55.6
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.3e-27 127.1 126 47.6
Peaxi162Scf00700g00244 Petunia axillaris HOM05D008744 ORTHO05D010647 4.8e-27 125.2 142 49.3
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 4.0e-26 122.1 127 46.5
Peaxi162Scf00270g00516 Petunia axillaris HOM05D008744 ORTHO05D010647 5.3e-26 121.7 156 44.2
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 6.9e-26 121.3 126 46.8
Nitab4.5_0006819g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.2e-25 120.6 162 42.6
Nitab4.5_0000078g0410 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.9e-23 113.2 87 62.1
Sopen06g026860 Solanum pennellii HOM05D008744 ORTHO05D010647 2.7e-22 109.4 125 42.4
Sopen06g027470 Solanum pennellii HOM05D008744 ORTHO05D010647 1.3e-21 107.1 122 44.3
Solyc06g069565.2 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.3e-21 106.3 125 41.6
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.9e-21 105.5 156 37.2
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 6.7e-21 104.8 121 38.8
Nitab4.5_0004942g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 6.7e-21 104.8 93 55.9
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.1e-19 99.8 154 33.8
Solyc03g150141.1 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.4e-18 96.3 79 60.8
Solyc09g010740.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.4e-18 96.3 76 53.9
Peaxi162Scf00494g00096 Petunia axillaris HOM05D008744 ORTHO05D010647 2.0e-17 93.2 149 39.6
Sopen04g016220 Solanum pennellii HOM05D008744 ORTHO05D010647 2.9e-16 89.4 95 45.3
Sopen09g030970 Solanum pennellii HOM05D008744 ORTHO05D010647 4.2e-15 85.5 106 38.7
Sopen04g016250 Solanum pennellii HOM05D008744 ORTHO05D010647 4.6e-14 82.0 82 50.0
Nitab4.5_0008949g0050 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.5e-12 76.3 44 70.5
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 2.1e-11 73.2 107 32.7
Sopen03g024130 Solanum pennellii HOM05D008744 ORTHO05D010647 1.1e-10 70.9 58 60.3
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 1.8e-10 70.1 122 32.0
Nitab4.5_0000043g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 4.0e-10 68.9 97 39.2
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-09 67.4 121 36.4
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 1.5e-09 67.0 113 37.2
Nitab4.5_0003217g0050 Nicotiana tabacum HOM05D008744 ORTHO05D015557 1.5e-09 67.0 92 37.0
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 5.8e-09 65.1 140 30.7
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 7.6e-09 64.7 126 34.1
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.0e-08 64.3 124 30.6
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.0e-08 64.3 126 31.0
CAN.G128.123 Capsicum annuum HOM05D001907 ORTHO05D015557 1.0e-08 64.3 125 31.2
CAN.G3720.1 Capsicum annuum HOM05D010354 ORTHO05D015557 1.0e-08 64.3 125 31.2
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-08 63.5 128 32.0
CAN.G128.119 Capsicum annuum HOM05D001907 ORTHO05D015557 2.9e-08 62.8 125 31.2
CAN.G128.124 Capsicum annuum HOM05D001907 ORTHO05D015557 2.9e-08 62.8 125 31.2
Solyc09g082090.1 Solanum lycopersicum HOM05D008744 ORTHO05D010647 3.8e-08 62.4 69 39.1
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.9e-08 62.0 88 34.1
arahy.Tifrunner.gnm1.ann1.82LERJ Arachis hypogaea HOM05D010841 ORTHO05D007789 6.5e-08 61.6 101 31.7
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 8.4e-08 61.2 135 28.9
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 1.1e-07 60.8 109 30.3
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.1e-07 60.8 142 28.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.4e-07 60.5 110 30.0
Cc02_g27330 Coffea canephora HOM05D008744 ORTHO05D010647 1.9e-07 60.1 125 33.6
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 2.5e-07 59.7 106 32.1
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 2.5e-07 59.7 135 28.9
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 2.5e-07 59.7 135 28.9
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-07 58.9 119 32.8
Thecc.01G408800 Theobroma cacao HOM05D008623 ORTHO05D007789 5.5e-07 58.5 135 30.4
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.5e-07 58.5 123 30.9
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.3e-07 57.8 110 29.1
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.3e-07 57.8 110 29.1
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.3e-07 57.8 119 31.9
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 9.3e-07 57.8 108 27.8
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-06 57.4 119 31.9
PGSC0003DMG400029323 Solanum tuberosum HOM05D008667 ORTHO05D010850 1.6e-06 57.0 112 35.7
Peaxi162Scf00191g00112 Petunia axillaris HOM05D008667 ORTHO05D010850 2.1e-06 56.6 130 30.8
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.6e-06 55.5 122 30.3
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.6e-06 55.5 122 30.3
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 6.0e-06 55.1 143 27.3
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.0e-06 55.1 89 36.0
Cc02_g25910 Coffea canephora HOM05D021019 ORTHO05D010647 7.9e-06 54.7 98 31.6


User provided reference genes

Program Settings