Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g095320.1 Solanum lycopersicum HOM05D005791 ORTHO05D007452 1.4e-44 182.6 89 100.0
Sopen03g025380 Solanum pennellii HOM05D005791 ORTHO05D007452 2.0e-40 168.7 86 94.2
Sopen03g025370 Solanum pennellii HOM05D005791 ORTHO05D007452 5.9e-40 167.2 86 93.0
Solyc03g095360.3 Solanum lycopersicum HOM05D005791 ORTHO05D007452 1.0e-39 166.4 86 93.0
CAN.G77.10 Capsicum annuum HOM05D005791 ORTHO05D007452 1.1e-38 162.9 86 87.2
Nitab4.5_0001493g0030 Nicotiana tabacum HOM05D005791 ORTHO05D007452 4.2e-38 161.0 86 88.4
Peaxi162Scf00073g02117 Petunia axillaris HOM05D005791 ORTHO05D007452 4.7e-37 157.5 86 84.9
Nitab4.5_0000103g0040 Nicotiana tabacum HOM05D005791 ORTHO05D007452 1.1e-35 152.9 87 85.1
Dinv21869 Davidia involucrata HOM05D005791 ORTHO05D007452 3.3e-35 151.4 86 81.4
CSS0010135 Camellia sinensis var. sinensis HOM05D005791 ORTHO05D007452 1.1e-33 146.4 86 77.9
Lj1A970G57 Lonicera japonica HOM05D005791 ORTHO05D007452 2.0e-32 142.1 87 78.2
Migut.F01222 Erythranthe guttata HOM05D005791 ORTHO05D007452 8.5e-31 136.7 86 72.1
HanXRQChr05g0144231 Helianthus annuus HOM05D005791 ORTHO05D007452 8.5e-31 136.7 86 69.8
HanXRQChr08g0222991 Helianthus annuus HOM05D005791 ORTHO05D007452 8.5e-31 136.7 86 72.1
Lsat_1_v5_gn_8_11160 Lactuca sativa HOM05D005791 ORTHO05D007452 8.5e-31 136.7 85 77.6
vmacro06873 Vaccinium macrocarpon HOM05D005791 ORTHO05D007452 1.9e-30 135.6 87 72.4
Actinidia31644 Actinidia chinensis HOM05D005791 ORTHO05D007452 2.5e-30 135.2 84 71.4
unitig_736.g22425 Utricularia gibba HOM05D005791 ORTHO05D007452 2.5e-30 135.2 85 71.8
Hma1.2p1_0264F.1_g105800 Hydrangea macrophylla HOM05D005791 ORTHO05D007452 4.2e-30 134.4 87 72.4
Rhsim03G0154600 Rhododendron simsii HOM05D005791 ORTHO05D007452 5.5e-30 134.0 87 72.4
Rhsim03G0154800 Rhododendron simsii HOM05D005791 ORTHO05D007452 5.5e-30 134.0 87 72.4
MSTRG.153 Avicennia marina HOM05D005791 ORTHO05D007452 7.2e-30 133.7 84 71.4
Oeu044175.1 Olea europaea HOM05D005791 ORTHO05D007452 1.6e-29 132.5 86 74.4
vmacro06874 Vaccinium macrocarpon HOM05D005791 ORTHO05D007452 2.1e-29 132.1 87 71.3
Psat5g069880 Pisum sativum HOM05D005791 ORTHO05D007452 4.7e-29 131.0 85 74.1
SGA_v2.0_scaffold78G25489 Striga asiatica HOM05D005791 ORTHO05D007452 8.0e-29 130.2 85 68.2
SalBow2G0183 Salvia bowleyana HOM05D005791 ORTHO05D007452 1.0e-28 129.8 84 72.6
Cc02_g05050 Coffea canephora HOM05D005791 ORTHO05D007452 1.4e-28 129.4 84 69.0
ATR1127G121 Amborella trichopoda HOM05D005791 ORTHO05D007452 1.8e-28 129.0 84 73.8
TAR636G2576 Trochodendron aralioides HOM05D005791 ORTHO05D007452 2.3e-28 128.6 84 70.2
Ca_16850_v3 Cicer arietinum L. HOM05D005791 ORTHO05D007452 6.7e-28 127.1 84 72.6
Glyma.06G140300 Glycine max HOM05D005791 ORTHO05D007452 6.7e-28 127.1 84 70.2
Oeu008099.1 Olea europaea HOM05D002347 ORTHO05D002969 6.7e-28 127.1 86 70.9
RcHm_v2.0_Chr1g0372751 Rosa chinensis HOM05D005791 ORTHO05D007452 6.7e-28 127.1 85 69.4
CsaV3_5G039240 Cucumis sativus L. HOM05D005791 ORTHO05D007452 1.2e-27 126.3 84 71.4
Glyma.04G224400 Glycine max HOM05D005791 ORTHO05D007452 1.2e-27 126.3 85 71.8
AT3G56460 Arabidopsis thaliana HOM05D005791 ORTHO05D007452 1.5e-27 125.9 85 70.6
Carub.0005s2323 Capsella rubella HOM05D005791 ORTHO05D007452 1.5e-27 125.9 85 69.4
CiPaw.02G199500 Carya illinoinensis HOM05D005791 ORTHO05D007452 1.5e-27 125.9 86 70.9
Lalb_Chr08g0239301 Lupinus albus HOM05D005791 ORTHO05D007452 1.5e-27 125.9 85 70.6
Medtr3g093620 Medicago truncatula HOM05D005791 ORTHO05D007452 1.5e-27 125.9 86 70.9
COL.COLO4_19494 Corchorus olitorius HOM05D005791 ORTHO05D007452 2.0e-27 125.6 85 67.1
MELO3C022102.2 Cucumis melo HOM05D005791 ORTHO05D007452 2.6e-27 125.2 84 70.2
ECA233G3482 Erigeron canadensis HOM05D005791 ORTHO05D007452 2.6e-27 125.2 86 67.4
Nn2g10215 Nelumbo nucifera HOM05D005791 ORTHO05D007452 4.4e-27 124.4 84 71.4
A07p22940 Brassica napus HOM05D005791 ORTHO05D007452 5.7e-27 124.0 85 69.4
BraA07t29959Z Brassica rapa HOM05D005791 ORTHO05D007452 5.7e-27 124.0 85 69.4
MD07G1238300 Malus domestica HOM05D005791 ORTHO05D007452 5.7e-27 124.0 86 68.6
DCAR_014656 Daucus carota HOM05D005791 ORTHO05D007452 7.5e-27 123.6 85 65.9
FAN10G1145 Fragaria x ananassa HOM05D005791 ORTHO05D007452 7.5e-27 123.6 85 68.2
TPR.G13959 Trifolium pratense HOM05D005791 ORTHO05D007452 7.5e-27 123.6 84 70.2
GSVIVG01032867001 Vitis vinifera HOM05D005791 ORTHO05D007452 7.5e-27 123.6 86 67.4
AL5G37790 Arabidopsis lyrata HOM05D005791 ORTHO05D007452 9.7e-27 123.2 85 68.2
VMungo1309G2173 Vigna mungo HOM05D005791 ORTHO05D007452 9.7e-27 123.2 85 69.4
Zm00001eb070150 Zea mays HOM05D005791 ORTHO05D007452 9.7e-27 123.2 85 64.7
BcaB02g07651 Brassica carinata HOM05D005791 ORTHO05D007452 1.3e-26 122.9 86 67.4
BcaC08g44785 Brassica carinata HOM05D005791 ORTHO05D007452 1.3e-26 122.9 86 67.4
BolC6t37528H Brassica oleracea HOM05D005791 ORTHO05D007452 1.3e-26 122.9 86 67.4
Thecc.10G187200 Theobroma cacao HOM05D005791 ORTHO05D007452 1.7e-26 122.5 88 65.9
arahy.Tifrunner.gnm1.ann1.B7UYEY Arachis hypogaea HOM05D005791 ORTHO05D007452 2.2e-26 122.1 85 70.6
arahy.Tifrunner.gnm1.ann1.PBP7IS Arachis hypogaea HOM05D005791 ORTHO05D007452 2.2e-26 122.1 85 70.6
AUR62031667 Chenopodium quinoa HOM05D005791 ORTHO05D007452 2.2e-26 122.1 85 64.7
Cfa001181 Carpinus fangiana HOM05D005791 ORTHO05D007452 2.8e-26 121.7 86 66.3
Aa31LG10G11340 Aethionema arabicum HOM05D005791 ORTHO05D007452 3.7e-26 121.3 84 67.9
CDE12G0791 Ceratophyllum demersum HOM05D005791 ORTHO05D007452 3.7e-26 121.3 83 69.9
ClCG11G005490 Citrullus lanatus HOM05D005791 ORTHO05D007452 3.7e-26 121.3 84 69.0
FvH4_7g26290 Fragaria vesca HOM05D005791 ORTHO05D007452 3.7e-26 121.3 84 67.9
FAN06G4413 Fragaria x ananassa HOM05D005791 ORTHO05D007452 3.7e-26 121.3 84 67.9
MBI15_g31024_MAGBIO Magnolia biondii HOM05D005791 ORTHO05D007452 3.7e-26 121.3 84 70.2
Potri.019G065700 Populus trichocarpa HOM05D005791 ORTHO05D007452 3.7e-26 121.3 88 65.9
PGR044G2580 Punica granatum HOM05D005791 ORTHO05D007452 3.7e-26 121.3 90 63.3
C06p23560 Brassica napus HOM05D005791 ORTHO05D007452 6.3e-26 120.6 86 66.3
Lj1g0000176 Lotus japonicus HOM05D005791 ORTHO05D007452 8.3e-26 120.2 84 69.0
Phvul.009G041600 Phaseolus vulgaris HOM05D005791 ORTHO05D007452 8.3e-26 120.2 85 68.2
Sed0013812 Sechium edule HOM05D005791 ORTHO05D007452 8.3e-26 120.2 84 69.0
Ciclev10031975m.g Citrus clementina HOM05D005791 ORTHO05D007452 1.1e-25 119.8 86 66.3
Eucgr.G03169 Eucalyptus grandis HOM05D005791 ORTHO05D007452 1.1e-25 119.8 90 63.3
Thhalv10006076m.g Eutrema salsugineum HOM05D005791 ORTHO05D007452 1.1e-25 119.8 85 67.1
Sc14g0005690 Simmondsia chinensis HOM05D005791 ORTHO05D007452 1.1e-25 119.8 84 63.1
Aqoxy2G00691 Aquilegia oxysepala HOM05D005791 ORTHO05D007452 1.4e-25 119.4 84 66.7
Manes.10G004300 Manihot esculenta HOM05D005791 ORTHO05D007452 1.4e-25 119.4 86 65.1
PSO339G3520 Papaver somniferum HOM05D005791 ORTHO05D007452 1.4e-25 119.4 84 67.9
PSO384G5040 Papaver somniferum HOM05D005791 ORTHO05D007452 1.4e-25 119.4 84 67.9
AUR62032550 Chenopodium quinoa HOM05D005791 ORTHO05D007452 1.8e-25 119.0 84 63.1
Hund13427 Selenicereus undatus HOM05D005791 ORTHO05D007452 1.8e-25 119.0 84 66.7
Sabra19G0078900 Salix brachista HOM05D005791 ORTHO05D007452 2.4e-25 118.6 89 64.0
Cpa.g.c38712.1 Carica papaya HOM05D005791 ORTHO05D007452 3.1e-25 118.2 84 67.9
Gohir.D05G278500 Gossypium hirsutum HOM05D005791 ORTHO05D007452 3.1e-25 118.2 89 65.2
Gorai.009G292000 Gossypium raimondii HOM05D005791 ORTHO05D007452 3.1e-25 118.2 89 65.2
Sp5g06080 Schrenkiella parvula HOM05D005791 ORTHO05D007452 4.1e-25 117.9 85 64.7
Duzib106G2079 Durio zibethinus HOM05D005791 ORTHO05D007452 5.3e-25 117.5 92 60.9
Gohir.A05G276800 Gossypium hirsutum HOM05D005791 ORTHO05D007452 7.0e-25 117.1 89 65.2
HPP92_024985 Vanilla planifolia HOM05D005791 ORTHO05D007452 7.0e-25 117.1 84 65.5
CANSAT56G2835 Cannabis sativa HOM05D005791 ORTHO05D007452 9.1e-25 116.7 84 65.5
Ah.10g030630 Amaranthus hybridus HOM05D005791 ORTHO05D007452 2.7e-24 115.2 84 61.9
HanXRQChr08g0222851 Helianthus annuus HOM05D005791 ORTHO05D007452 2.7e-24 115.2 86 67.4
MD00G1044900 Malus domestica HOM05D005791 ORTHO05D007452 2.7e-24 115.2 86 62.8
TWI09G0105 Tripterygium wilfordii HOM05D005791 ORTHO05D007452 2.7e-24 115.2 84 65.5
CARHR166580 Cardamine hirsuta HOM05D005791 ORTHO05D007452 4.5e-24 114.4 84 65.5
QL08p065276 Quercus lobata HOM05D005791 ORTHO05D007452 7.7e-24 113.6 85 65.9
Atru.chr12.209 Acer truncatum HOM05D005791 ORTHO05D007452 1.0e-23 113.2 86 61.6
Gohir.D13G009100 Gossypium hirsutum HOM05D005791 ORTHO05D007452 1.0e-23 113.2 86 59.3
Gorai.013G009900 Gossypium raimondii HOM05D005791 ORTHO05D007452 1.0e-23 113.2 86 59.3
Gohir.A13G008400 Gossypium hirsutum HOM05D005791 ORTHO05D007452 1.3e-23 112.8 86 59.3
Gohir.A13G008500 Gossypium hirsutum HOM05D005791 ORTHO05D007452 1.3e-23 112.8 86 59.3
DCAR_018050 Daucus carota HOM05D005791 ORTHO05D007452 1.7e-23 112.5 84 61.9
EL10Ac2g02691 Beta vulgaris HOM05D005791 ORTHO05D007452 6.5e-23 110.5 84 61.9
SEGI_06672 Sequoiadendron giganteum HOM05D005791 ORTHO05D007452 6.5e-23 110.5 84 60.7
ECA233G0423 Erigeron canadensis HOM05D005791 ORTHO05D007452 1.9e-22 109.0 92 57.6
CDE10G1308 Ceratophyllum demersum HOM05D005791 ORTHO05D007452 9.4e-22 106.7 84 58.3
MD11G1140100 Malus domestica HOM05D005791 ORTHO05D007452 2.7e-21 105.1 84 60.7
THA.LOC104803216 Tarenaya hassleriana HOM05D005791 ORTHO05D007452 4.7e-21 104.4 86 60.5
Os05g0313500 Oryza sativa ssp. japonica HOM05D005791 ORTHO05D007452 5.2e-20 100.9 74 62.2
Pp3c16_1190 Physcomitrium patens HOM05D005791 ORTHO05D007452 1.2e-19 99.8 84 59.5
SMO164G0125 Selaginella moellendorffii HOM05D005791 ORTHO05D007452 1.8e-17 92.4 84 56.0
HPP92_024988 Vanilla planifolia HOM05D005791 ORTHO05D007452 2.7e-16 88.6 73 61.6
AagrBONN_evm.TU.Sc2ySwM_362.2815 Anthoceros agrestis HOM05D005791 ORTHO05D007452 3.8e-15 84.7 82 54.9
Mapoly0006s0302 Marchantia polymorpha HOM05D005791 ORTHO05D007452 1.1e-14 83.2 84 50.0
Lsat_1_v5_gn_8_11180 Lactuca sativa HOM05D005791 ORTHO05D007452 3.4e-11 71.6 49 75.5
MCO07G403 Micromonas commoda HOM05D005791 ORTHO05D007452 2.8e-10 68.6 84 47.6
Cre16.g674050 Chlamydomonas reinhardtii HOM05D005791 ORTHO05D007452 2.5e-06 55.5 83 39.8


User provided reference genes

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