Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.5e-97 359.4 169 100.0
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.5e-92 342.0 160 100.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.8e-90 335.9 160 98.1
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 6.5e-80 300.8 168 81.5
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.0e-77 293.5 160 82.5
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.4e-77 293.1 163 79.8
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.3e-77 292.4 163 80.4
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 3.0e-77 292.0 168 78.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 6.7e-77 290.8 169 77.5
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 2.5e-76 288.9 164 76.8
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 4.3e-76 288.1 160 81.2
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 5.7e-76 287.7 167 79.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 7.4e-76 287.3 160 80.0
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.3e-75 286.6 152 84.2
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.3e-75 286.6 160 80.6
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.2e-75 285.8 168 76.8
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.8e-75 285.4 161 78.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 3.7e-75 285.0 167 76.6
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.8e-75 284.6 161 80.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 6.3e-75 284.3 169 75.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 6.3e-75 284.3 168 78.0
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 8.2e-75 283.9 168 76.8
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 8.2e-75 283.9 168 76.2
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.4e-74 283.1 161 78.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.4e-74 283.1 168 75.6
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.8e-74 282.7 160 78.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.8e-74 282.7 168 76.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.8e-74 282.7 168 75.0
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 4.1e-74 281.6 160 79.4
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 4.1e-74 281.6 168 75.6
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.1e-74 281.6 157 79.6
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 5.3e-74 281.2 168 76.2
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 6.9e-74 280.8 168 77.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-73 280.0 160 80.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.2e-73 280.0 160 80.0
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-73 280.0 159 79.2
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-73 280.0 159 79.2
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.2e-73 280.0 159 79.2
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.5e-73 279.6 168 75.0
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.5e-73 279.6 168 75.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.0e-73 279.3 168 74.4
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.0e-73 279.3 161 77.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.6e-73 278.9 168 76.2
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.4e-73 278.5 167 76.6
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 4.5e-73 278.1 169 74.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 5.9e-73 277.7 160 80.0
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 7.7e-73 277.3 168 76.2
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 2.9e-72 275.4 160 76.2
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.9e-72 275.4 158 78.5
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.0e-72 274.6 159 75.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 8.5e-72 273.9 160 75.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.4e-71 273.1 160 75.6
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.2e-71 271.6 160 75.6
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 4.2e-71 271.6 168 72.0
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 4.2e-71 271.6 157 78.3
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 5.5e-71 271.2 170 71.8
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.6e-70 269.6 168 71.4
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.6e-70 268.5 169 72.8
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.4e-69 266.5 155 76.1
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 3.0e-69 265.4 170 71.2
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.9e-69 265.0 161 71.4
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 3.9e-69 265.0 164 72.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 5.1e-69 264.6 154 77.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.6e-68 262.3 164 71.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.6e-68 262.3 164 71.3
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.3e-68 261.9 164 71.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 7.4e-68 260.8 164 71.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 7.4e-68 260.8 164 70.7
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.3e-67 260.0 168 68.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.7e-67 259.6 157 72.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.2e-67 259.2 164 70.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 3.7e-67 258.5 157 72.6
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 8.2e-67 257.3 164 70.1
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.1e-66 256.9 164 70.1
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.1e-66 256.9 164 70.1
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.4e-66 255.8 165 69.1
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 9.1e-66 253.8 206 58.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 2.6e-65 252.3 164 68.3
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 2.2e-64 249.2 152 70.4
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.9e-64 248.8 155 68.4
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-63 246.9 159 70.4
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-63 246.9 159 70.4
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.4e-63 246.5 159 68.6
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.0e-61 238.8 159 67.3
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 9.7e-60 233.8 122 82.0
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.2e-57 226.9 154 62.3
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.0e-57 226.1 122 81.1
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.5e-57 224.9 152 61.8
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 8.0e-54 214.2 167 59.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 6.7e-53 211.1 143 58.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.7e-51 206.5 143 59.4
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 6.3e-51 204.5 142 59.2
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.1e-50 201.8 143 58.0
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 7.3e-31 137.9 91 67.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.4e-26 122.9 142 35.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 4.1e-26 122.1 132 39.4
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.6e-12 76.3 37 91.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 4.9e-11 72.0 37 86.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.1e-10 68.2 47 72.3
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 7.1e-10 68.2 47 72.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.6e-09 67.0 47 59.6
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.7e-09 66.2 37 78.4
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.0e-08 62.8 37 75.7
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.0e-08 62.8 37 75.7
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.5e-07 59.7 50 56.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.5e-07 59.7 50 56.0
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.5e-07 57.8 38 65.8
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.5e-07 57.8 38 65.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.8e-06 56.2 49 51.0


User provided reference genes

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