Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.2e-204 714.5 378 100.0
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 3.7e-200 701.4 379 98.4
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.7e-197 692.6 380 97.4
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 6.7e-186 654.1 379 91.8
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 3.8e-181 638.3 379 87.9
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.5e-180 636.3 379 90.8
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 1.7e-173 612.8 331 99.7
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 3.2e-159 565.5 378 74.1
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.7e-158 562.4 380 76.3
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 3.5e-158 562.0 381 76.1
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.3e-157 559.3 379 76.0
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 6.6e-157 557.8 379 74.1
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.5e-156 555.8 377 73.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 3.3e-156 555.4 379 73.4
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.2e-155 553.5 379 75.7
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.2e-155 553.5 380 73.2
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 4.7e-155 551.6 379 72.3
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 6.2e-155 551.2 378 73.8
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.1e-154 548.9 379 73.6
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 8.9e-154 547.4 377 73.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 3.4e-153 545.4 379 72.8
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 4.4e-153 545.0 378 72.0
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.9e-152 542.3 379 72.0
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 3.7e-152 542.0 379 71.2
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.1e-151 540.4 379 71.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.4e-151 540.0 379 72.6
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 4.6e-150 535.0 379 71.8
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.0e-149 533.9 377 71.9
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 5.0e-149 531.6 378 72.0
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 8.6e-149 530.8 380 70.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 8.6e-149 530.8 382 70.4
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.5e-148 530.0 378 71.2
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.3e-148 528.9 432 65.0
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 4.3e-148 528.5 379 70.2
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 7.3e-148 527.7 380 69.5
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 9.5e-148 527.3 388 70.9
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 9.5e-148 527.3 407 67.1
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.6e-147 526.6 380 70.5
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 2.1e-147 526.2 403 67.5
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 2.8e-147 525.8 409 66.7
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.8e-147 525.8 377 71.6
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 4.7e-147 525.0 380 69.7
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 8.1e-147 524.2 379 69.9
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 8.1e-147 524.2 380 69.2
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.8e-146 523.1 404 67.6
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 4.0e-146 521.9 380 68.9
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.4e-145 518.8 383 70.2
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.7e-144 516.5 378 71.4
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.2e-144 516.2 380 68.4
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 3.7e-144 515.4 399 66.4
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 3.7e-144 515.4 362 74.3
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.9e-144 515.0 383 68.7
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.1e-143 513.8 380 68.7
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.1e-143 513.8 385 68.3
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.9e-143 513.1 379 68.1
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 4.1e-143 511.9 432 65.0
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 5.4e-143 511.5 380 68.9
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 7.1e-143 511.1 379 67.0
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.2e-142 510.4 379 67.3
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.2e-142 510.4 378 67.2
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 1.6e-142 510.0 434 62.4
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.3e-141 506.9 379 67.3
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.7e-141 506.5 378 67.2
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.5e-140 503.4 378 66.4
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.9e-140 503.1 378 66.7
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 3.3e-140 502.3 384 67.7
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 4.3e-140 501.9 355 71.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 7.3e-140 501.1 378 65.9
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 7.3e-140 501.1 379 66.8
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.2e-139 500.4 378 66.1
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.1e-139 499.6 379 67.5
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 3.6e-139 498.8 374 66.0
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 6.2e-139 498.0 373 66.5
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 8.1e-139 497.7 376 65.7
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.1e-138 497.3 378 65.6
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-138 497.3 389 64.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.8e-138 496.5 379 65.4
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 1.2e-137 493.8 385 66.2
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.5e-137 493.4 378 65.3
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 2.0e-137 493.0 382 65.7
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 7.6e-137 491.1 379 66.2
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 7.6e-137 491.1 379 65.7
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.9e-136 489.2 379 64.9
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.8e-136 488.8 379 65.4
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.9e-136 488.4 379 65.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 8.4e-136 487.6 379 65.7
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 8.4e-136 487.6 379 65.7
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 7.8e-134 481.1 396 62.6
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 6.6e-133 478.0 387 63.0
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-129 466.5 410 59.5
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 3.4e-129 465.7 459 55.3
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.1e-127 460.7 388 62.6
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 7.1e-127 458.0 322 70.8
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.6e-126 455.3 379 61.2
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 3.9e-125 452.2 383 61.1
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 2.6e-121 439.5 382 60.2
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.9e-120 436.0 382 61.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 6.4e-120 434.9 378 59.0
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.4e-120 434.5 379 61.2
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.1e-119 434.1 382 61.5
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 3.3e-116 422.5 276 79.0
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.6e-110 403.7 410 54.6
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 6.0e-110 401.7 386 54.4
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 2.5e-108 396.4 277 72.6
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 3.8e-104 382.5 387 53.7
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 3.2e-71 273.1 245 58.0
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 3.6e-70 269.6 413 39.0
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.1e-66 258.1 460 37.8
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.7e-62 242.7 158 74.1
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.2e-60 238.0 158 73.4
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.7e-60 235.7 161 72.0
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.0e-48 198.4 149 67.1
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-48 198.0 161 62.7
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 3.3e-47 193.4 342 37.1
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.4e-42 177.2 129 65.1
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 5.6e-39 166.0 140 55.0
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.3e-39 165.6 123 66.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.2e-33 148.3 109 72.5
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 1.2e-30 138.3 102 63.7
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 2.2e-27 127.5 103 60.2
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.6e-22 110.2 84 65.5
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 6.8e-21 105.9 95 60.0
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 8.4e-11 72.4 124 36.3
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 7.8e-09 65.9 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.7e-08 64.7 39 76.9


User provided reference genes

Program Settings