Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.3e-45 185.3 96 100.0
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 6.6e-45 183.7 96 99.0
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.3e-40 169.5 96 93.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 2.8e-40 168.3 96 89.6
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.5e-38 161.0 96 85.4
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 2.3e-37 158.7 96 85.4
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 3.6e-35 151.4 94 81.9
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 4.7e-35 151.0 91 83.5
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 4.7e-35 151.0 94 84.0
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.0e-34 149.8 83 92.8
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 3.1e-34 148.3 94 83.0
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 3.1e-34 148.3 87 85.1
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 4.0e-34 147.9 91 84.6
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 6.8e-34 147.1 86 89.5
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 2.6e-33 145.2 94 81.9
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.6e-33 145.2 86 88.4
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 2.6e-33 145.2 85 90.6
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.4e-33 144.8 94 80.9
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 3.4e-33 144.8 83 91.6
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 3.4e-33 144.8 83 91.6
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 3.4e-33 144.8 83 91.6
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 5.8e-33 144.1 91 83.5
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 5.8e-33 144.1 90 82.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 5.8e-33 144.1 94 80.9
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 7.5e-33 143.7 94 80.9
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 9.8e-33 143.3 77 93.5
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.3e-32 142.9 92 81.5
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.3e-32 142.9 85 88.2
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.3e-32 142.9 84 88.1
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.2e-32 142.1 94 78.7
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.2e-32 142.1 90 81.1
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 2.2e-32 142.1 94 79.8
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.9e-32 141.7 93 82.8
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 3.7e-32 141.4 77 92.2
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 3.7e-32 141.4 88 84.1
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 3.7e-32 141.4 94 76.6
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.7e-32 141.4 93 79.6
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 6.4e-32 140.6 94 78.7
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 6.4e-32 140.6 94 78.7
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 6.4e-32 140.6 84 86.9
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 8.3e-32 140.2 84 84.5
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.4e-31 139.4 86 79.1
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.9e-31 139.0 84 83.3
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.9e-31 139.0 88 81.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.9e-31 139.0 77 89.6
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 2.4e-31 138.7 90 74.4
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.4e-31 138.7 91 79.1
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 3.2e-31 138.3 90 82.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 3.2e-31 138.3 84 85.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 3.2e-31 138.3 89 78.7
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.1e-31 137.9 81 81.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 4.1e-31 137.9 78 88.5
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 4.1e-31 137.9 76 88.2
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 5.4e-31 137.5 87 83.9
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 5.4e-31 137.5 85 76.5
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 5.4e-31 137.5 94 79.8
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 9.2e-31 136.7 94 71.3
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 9.2e-31 136.7 82 86.6
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 9.2e-31 136.7 94 78.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.6e-30 136.0 84 82.1
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.6e-30 136.0 89 79.8
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 2.7e-30 135.2 94 74.5
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.5e-30 134.8 94 72.3
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.5e-30 134.8 94 72.3
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 3.5e-30 134.8 94 74.5
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 6.0e-30 134.0 109 69.7
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 6.0e-30 134.0 91 75.8
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 7.8e-30 133.7 94 71.3
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 7.8e-30 133.7 93 76.3
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.0e-29 133.3 91 74.7
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.0e-29 133.3 91 74.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.0e-29 133.3 94 74.5
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.3e-29 132.9 82 78.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-29 132.9 91 70.3
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-29 132.9 91 70.3
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 1.3e-29 132.9 91 70.3
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.3e-29 132.9 90 81.1
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.3e-29 132.9 94 74.5
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.3e-29 132.1 95 71.6
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 3.0e-29 131.7 74 86.5
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.9e-29 131.3 78 83.3
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 5.0e-29 131.0 75 88.0
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 5.0e-29 131.0 90 74.4
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 5.0e-29 131.0 91 69.2
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.1e-28 129.8 84 75.0
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.5e-28 129.4 108 69.4
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.9e-28 129.0 82 75.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.9e-28 129.0 82 82.9
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.5e-28 128.6 70 90.0
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.3e-28 127.9 91 72.5
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.3e-28 127.1 113 64.6
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 9.5e-28 126.7 97 66.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.6e-27 125.9 82 74.4
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.6e-27 125.9 82 74.4
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.6e-27 125.9 76 80.3
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-27 125.6 82 74.4
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.1e-27 125.6 82 74.4
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-27 125.6 82 74.4
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.1e-27 125.6 82 74.4
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.8e-27 125.2 85 75.3
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.8e-27 125.2 99 68.7
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-27 124.8 91 68.1
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 6.2e-27 124.0 77 84.4
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-26 123.2 79 74.7
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 1.1e-26 123.2 70 90.0
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.1e-26 123.2 92 63.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.1e-26 123.2 70 87.1
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 2.3e-26 122.1 119 61.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 5.2e-26 120.9 80 78.8
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-26 120.6 82 72.0
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.5e-25 119.4 97 69.1
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.0e-25 119.0 87 70.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 2.2e-24 115.5 69 81.2
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.7e-24 114.8 78 76.9
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 8.3e-24 113.6 68 83.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.9e-23 112.5 87 66.7
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.0e-21 106.7 66 78.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 4.3e-20 101.3 73 68.5
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 8.9e-18 93.6 83 56.6
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 4.9e-16 87.8 71 66.2
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 6.4e-16 87.4 89 59.6
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 5.4e-15 84.3 68 66.2
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 7.8e-14 80.5 69 56.5
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.3e-13 79.0 79 51.9
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.5e-12 75.5 47 78.7
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 4.7e-11 71.2 68 54.4
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.7e-11 71.2 59 62.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 6.2e-11 70.9 57 61.4
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 8.4e-08 60.5 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 8.4e-08 60.5 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 8.4e-08 60.5 48 60.4


User provided reference genes

Program Settings