Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g083120.3 Solanum lycopersicum HOM05D001081 ORTHO05D024756 1.1e-150 536.6 260 100.0
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 3.5e-93 345.5 168 99.4
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 6.5e-71 271.6 170 78.8
Nitab4.5_0006933g0040 Nicotiana tabacum HOM05D001081 ORTHO05D004708 6.7e-68 261.5 170 78.2
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 2.3e-60 236.5 171 72.5
Peaxi162Scf00740g00140 Petunia axillaris HOM05D001081 ORTHO05D024756 7.7e-56 221.5 171 66.1
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 2.4e-41 173.3 179 52.0
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 3.1e-41 172.9 186 48.4
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 2.7e-40 169.9 155 54.2
Hma1.2p1_0404F.1_g145340 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 2.9e-39 166.4 170 51.2
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 6.5e-39 165.2 173 49.7
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.1e-38 164.5 159 54.1
Hma1.2p1_0404F.1_g145380 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 5.5e-38 162.2 139 57.6
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 7.2e-38 161.8 180 48.3
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 7.2e-38 161.8 131 61.8
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 4.4e-35 152.5 173 48.0
Migut.F00208 Erythranthe guttata HOM05D001081 ORTHO05D004708 6.3e-34 148.7 173 45.1
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 6.3e-34 148.7 168 44.6
Ca_12791_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 8.3e-34 148.3 160 47.5
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 3.1e-33 146.4 179 45.8
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 9.1e-33 144.8 168 50.6
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 4.5e-32 142.5 161 46.6
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 5.9e-32 142.1 151 49.0
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 2.3e-31 140.2 131 53.4
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 3.8e-31 139.4 147 51.0
FvH4_7g31511 Fragaria vesca HOM05D001081 ORTHO05D004708 6.5e-31 138.7 145 46.9
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 6.5e-31 138.7 145 46.9
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 2.5e-30 136.7 172 43.0
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 1.2e-29 134.4 156 50.0
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 2.1e-29 133.7 138 51.4
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 2.1e-29 133.7 138 51.4
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 3.6e-29 132.9 132 49.2
TWI39G0245 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 6.1e-29 132.1 132 53.0
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 8.0e-29 131.7 143 47.6
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 1.0e-28 131.3 150 45.3
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 1.8e-28 130.6 137 49.6
Cpa.g.sc3.91 Carica papaya HOM05D001081 ORTHO05D004708 3.0e-28 129.8 162 45.7
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 5.2e-28 129.0 143 46.9
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.2e-27 127.9 96 64.6
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 1.5e-27 127.5 135 48.1
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.0e-27 127.1 155 44.5
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 2.6e-27 126.7 158 48.1
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 2.6e-27 126.7 155 46.5
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 4.4e-27 125.9 134 49.3
Sabra15G0068100 Salix brachista HOM05D001081 ORTHO05D004708 4.4e-27 125.9 134 49.3
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 5.7e-27 125.6 131 49.6
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 5.7e-27 125.6 138 45.7
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 9.8e-27 124.8 131 48.9
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 9.8e-27 124.8 141 41.8
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 1.3e-26 124.4 156 45.5
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 1.3e-26 124.4 155 44.5
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 1.3e-26 124.4 156 45.5
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 1.3e-26 124.4 156 45.5
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.7e-26 124.0 135 47.4
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 2.2e-26 123.6 182 40.7
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 2.2e-26 123.6 155 41.9
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 2.8e-26 123.2 155 41.9
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 3.7e-26 122.9 141 45.4
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 3.7e-26 122.9 155 43.2
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 3.7e-26 122.9 155 43.2
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 4.9e-26 122.5 132 50.0
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.4e-25 120.9 155 41.9
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.4e-25 120.9 132 47.7
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 2.4e-25 120.2 159 45.3
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 2.4e-25 120.2 150 45.3
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 4.1e-25 119.4 157 43.9
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 5.4e-25 119.0 132 46.2
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 9.2e-25 118.2 155 40.6
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 1.2e-24 117.9 130 50.0
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 2.0e-24 117.1 157 41.4
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.0e-23 114.8 155 40.6
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.0e-23 114.8 154 41.6
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.3e-23 114.4 154 41.6
Carub.0006s2204 Capsella rubella HOM05D001081 ORTHO05D024756 1.7e-23 114.0 158 44.3
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 3.8e-23 112.8 147 42.9
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 8.6e-23 111.7 165 40.6
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 1.1e-22 111.3 155 41.9
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 1.1e-22 111.3 155 41.9
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 1.5e-22 110.9 147 42.9
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 2.5e-22 110.2 141 42.6
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 3.3e-22 109.8 154 40.3
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 7.3e-22 108.6 121 44.6
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 9.5e-22 108.2 146 42.5
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 6.1e-21 105.5 131 43.5
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 1.0e-20 104.8 138 42.0
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.0e-20 103.2 155 37.4
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 5.2e-20 102.4 144 39.6
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 8.9e-20 101.7 172 33.7
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.4e-19 99.8 137 41.6
SEGI_15117 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 2.2e-18 97.1 189 37.6
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 5.4e-17 92.4 193 33.7
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 2.0e-16 90.5 150 40.7
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 1.7e-10 70.9 39 79.5
Lalb_Chr10g0091351 Lupinus albus HOM05D001081 ORTHO05D004708 1.1e-09 68.2 110 35.5
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.9e-09 67.4 44 70.5
SGA_v2.0_scaffold9G04846 Striga asiatica HOM05D001081 ORTHO05D004708 3.2e-09 66.6 39 79.5
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 4.1e-09 66.2 34 88.2
HanXRQChr06g0165641 Helianthus annuus HOM05D001081 ORTHO05D024756 1.6e-08 64.3 72 48.6
HanXRQChr08g0231511 Helianthus annuus HOM05D001081 ORTHO05D024756 1.6e-08 64.3 72 48.6
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 2.1e-08 63.9 33 84.8
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 6.0e-08 62.4 41 70.7
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 6.0e-08 62.4 41 70.7
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 7.8e-08 62.0 30 93.3
HanXRQChr10g0291811 Helianthus annuus HOM05D001081 ORTHO05D004708 1.5e-06 57.8 28 92.9
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 1.9e-06 57.4 28 89.3
Aa31LG11G3510 Aethionema arabicum HOM05D001081 ORTHO05D004708 5.6e-06 55.8 29 86.2
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 5.6e-06 55.8 159 28.3
Actinidia04725 Actinidia chinensis HOM05D001081 ORTHO05D004708 7.3e-06 55.5 35 68.6


User provided reference genes

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