Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 2.6e-161 572.0 295 100.0
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 8.5e-160 567.0 295 99.0
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.1e-158 562.4 295 97.6
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 3.3e-148 528.5 297 92.6
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 1.4e-146 523.1 295 91.5
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.6e-134 481.9 295 80.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 4.7e-134 481.5 295 81.4
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 8.0e-134 480.7 295 82.0
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.4e-132 474.9 295 80.7
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 7.5e-132 474.2 295 81.0
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.3e-131 473.4 295 80.3
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.2e-129 466.8 295 79.0
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 4.5e-129 464.9 295 80.0
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 3.8e-128 461.8 295 78.3
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 2.1e-126 456.1 297 77.8
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 1.2e-124 450.3 295 76.6
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.6e-124 449.1 314 77.7
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 5.7e-124 448.0 312 74.4
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 1.3e-123 446.8 300 75.7
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 2.2e-123 446.0 299 76.3
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 1.1e-122 443.7 303 75.2
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.8e-122 443.0 304 73.4
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.2e-121 440.3 298 75.2
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 1.6e-121 439.9 312 73.4
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.6e-121 439.9 312 73.1
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.6e-121 439.9 312 73.1
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 2.0e-121 439.5 303 74.3
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.0e-121 439.5 336 72.6
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 4.5e-121 438.3 300 75.0
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 5.9e-121 438.0 300 74.3
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 5.9e-121 438.0 312 73.7
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.3e-120 436.8 301 75.1
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 1.3e-120 436.8 300 75.0
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.7e-120 436.4 295 73.2
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 1.7e-120 436.4 341 67.4
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-120 436.0 300 75.3
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-120 436.0 300 75.0
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 3.8e-120 435.3 300 75.0
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.8e-120 435.3 300 75.0
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 6.6e-120 434.5 273 78.0
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 8.6e-120 434.1 300 74.7
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 1.5e-119 433.3 309 72.5
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 2.5e-119 432.6 306 71.9
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 4.2e-119 431.8 302 72.8
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 4.2e-119 431.8 305 72.5
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 4.2e-119 431.8 294 74.5
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 2.8e-118 429.1 273 76.2
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 2.8e-118 429.1 305 72.5
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 2.8e-118 429.1 301 73.4
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 3.6e-118 428.7 292 72.9
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.4e-117 426.8 269 77.0
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 1.8e-117 426.4 303 74.6
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 5.2e-117 424.9 306 69.6
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 2.0e-116 422.9 302 72.5
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 2.0e-116 422.9 302 72.5
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 2.0e-116 422.9 314 71.3
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 3.4e-116 422.2 305 69.5
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 4.4e-116 421.8 306 70.9
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 4.4e-116 421.8 299 71.9
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 5.7e-116 421.4 306 69.3
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 7.5e-116 421.0 331 67.7
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 7.5e-116 421.0 331 67.7
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.3e-115 420.2 306 70.3
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.2e-115 419.5 306 70.3
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 2.2e-115 419.5 306 69.9
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 2.8e-115 419.1 306 70.3
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.7e-115 418.7 306 70.3
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 4.9e-115 418.3 301 72.1
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 6.3e-115 417.9 306 69.6
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 8.3e-115 417.5 308 70.1
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 1.4e-114 416.8 306 69.6
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 1.4e-114 416.8 306 68.6
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 3.1e-114 415.6 300 71.7
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 4.1e-114 415.2 308 68.8
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 9.2e-114 414.1 310 71.0
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 1.2e-113 413.7 296 70.9
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.2e-113 413.7 271 73.1
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.0e-112 410.6 301 71.8
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 2.9e-112 409.1 285 73.3
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 3.8e-112 408.7 302 71.2
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 1.1e-111 407.1 296 70.3
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 2.5e-111 406.0 335 64.5
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 3.6e-110 402.1 305 68.5
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 4.7e-110 401.7 307 69.1
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.0e-109 400.6 288 70.5
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.4e-109 400.2 305 68.9
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 5.2e-109 398.3 305 67.9
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 1.2e-108 397.1 295 69.8
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 3.7e-107 392.1 319 68.3
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 2.4e-106 389.4 278 74.1
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 4.1e-106 388.7 304 67.1
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.4e-101 373.6 306 65.0
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 4.9e-99 365.2 297 66.7
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 5.1e-96 355.1 320 61.2
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.2e-94 348.2 220 78.2
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.6e-89 333.6 272 63.6
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 2.3e-88 329.7 309 57.6
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 4.7e-86 322.0 291 58.8
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 6.4e-83 311.6 233 70.8
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.1e-81 306.6 237 67.9
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 3.0e-80 302.8 278 58.3
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 8.7e-80 301.2 202 77.7
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.7e-73 279.6 254 61.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 1.9e-71 273.5 295 51.2
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.7e-67 260.4 208 66.8
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.1e-65 253.4 156 87.8
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.2e-59 233.4 263 46.4
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 2.5e-55 219.9 283 42.4
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 8.2e-54 214.9 192 61.5
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 1.2e-49 201.1 316 38.3
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 4.8e-46 189.1 285 37.2
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 4.6e-41 172.6 225 44.0
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.4e-40 171.0 288 42.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 7.4e-39 165.2 244 38.9
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 3.6e-33 146.4 116 61.2
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.4e-29 134.4 301 32.9
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 5.9e-28 129.0 88 75.0
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 1.0e-19 101.7 74 66.2
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 8.0e-17 92.0 93 52.7
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 1.5e-15 87.8 135 43.0
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.4e-15 86.3 78 55.1
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 2.7e-09 67.0 79 55.7
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.4e-08 64.7 57 50.9


User provided reference genes

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