Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g078840.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.0e-33 145.2 73 100.0
Sopen03g027330 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-28 128.3 66 95.5
PGSC0003DMG400021698 Solanum tuberosum HOM05D000056 ORTHO05D000019 9.8e-25 116.3 69 82.6
PGSC0003DMG400037036 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.8e-19 98.2 71 73.2
Sopen03g027340 Solanum pennellii HOM05D000056 ORTHO05D000019 1.5e-17 92.4 70 67.1
Solyc03g078830.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.8e-16 88.2 64 67.2
Peaxi162Scf00611g00026 Petunia axillaris HOM05D000056 ORTHO05D000019 7.3e-12 73.6 70 51.4
Nitab4.5_0007072g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.2e-11 72.8 69 53.6
Nitab4.5_0000175g0410 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.0e-10 69.7 66 50.0
Dinv01929 Davidia involucrata HOM05D000056 ORTHO05D000019 3.1e-10 68.2 70 48.6
Nitab4.5_0000226g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 4.0e-10 67.8 65 53.8
Peaxi162Scf00111g00085 Petunia axillaris HOM05D000056 ORTHO05D000019 5.2e-10 67.4 60 53.3
Peaxi162Scf00558g00002 Petunia axillaris HOM05D000056 ORTHO05D000019 1.2e-09 66.2 70 51.4
Peaxi162Scf00558g00004 Petunia axillaris HOM05D000056 ORTHO05D000019 1.2e-09 66.2 70 51.4
Dinv03859 Davidia involucrata HOM05D000056 ORTHO05D000019 2.0e-09 65.5 69 44.9
Nitab4.5_0000550g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.0e-09 65.5 59 52.5
Nitab4.5_0015129g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.0e-09 65.5 50 56.0
Solyc10g079230.3 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.0e-09 65.5 69 49.3
Nitab4.5_0000881g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.6e-09 65.1 59 49.2
CAN.G641.32 Capsicum annuum HOM05D000056 ORTHO05D000019 3.4e-09 64.7 70 48.6
Nitab4.5_0000082g0340 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.4e-09 64.7 70 48.6
Nitab4.5_0001249g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.4e-09 64.7 70 48.6
Sopen10g029880 Solanum pennellii HOM05D000056 ORTHO05D000019 3.4e-09 64.7 70 48.6
PGSC0003DMG400008173 Solanum tuberosum HOM05D000056 ORTHO05D000019 3.4e-09 64.7 70 48.6
Dinv02639 Davidia involucrata HOM05D000056 ORTHO05D000019 4.4e-09 64.3 69 43.5
Dinv03860 Davidia involucrata HOM05D000056 ORTHO05D000019 5.8e-09 63.9 69 46.4
PGSC0003DMG400010632 Solanum tuberosum HOM05D000056 ORTHO05D000019 9.8e-09 63.2 56 51.8
Rhsim10G0160600 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.3e-08 62.8 58 51.7
Nitab4.5_0011518g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.7e-08 62.4 68 47.1
Rhsim02G0207700 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.7e-08 62.4 70 44.3
Rhsim03G0032500 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.7e-08 62.4 69 44.9
Dinv02638 Davidia involucrata HOM05D000056 ORTHO05D000019 2.2e-08 62.0 68 44.1
Dinv03853 Davidia involucrata HOM05D000056 ORTHO05D000019 2.2e-08 62.0 53 52.8
Nitab4.5_0001777g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.2e-08 62.0 56 51.8
Rhsim03G0032300 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.2e-08 62.0 69 44.9
Rhsim03G0033000 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.2e-08 62.0 69 44.9
Dinv01138 Davidia involucrata HOM05D000056 ORTHO05D000019 2.9e-08 61.6 70 44.3
Rhsim02G0207900 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.9e-08 61.6 70 45.7
Dinv18476 Davidia involucrata HOM05D000056 ORTHO05D000019 3.7e-08 61.2 64 45.3
RhsimUnG0217300 Rhododendron simsii HOM05D000056 ORTHO05D000019 3.7e-08 61.2 69 43.5
vmacro22388 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 3.7e-08 61.2 58 48.3
Dinv03852 Davidia involucrata HOM05D000056 ORTHO05D000019 4.9e-08 60.8 45 62.2
Rhsim03G0034700 Rhododendron simsii HOM05D000056 ORTHO05D000019 4.9e-08 60.8 58 46.6
vmacro22386 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 4.9e-08 60.8 58 48.3
Dinv18669 Davidia involucrata HOM05D000056 ORTHO05D000019 6.4e-08 60.5 53 50.9
Dinv04137 Davidia involucrata HOM05D000056 ORTHO05D000019 1.4e-07 59.3 70 44.3
Dinv18691 Davidia involucrata HOM05D000056 ORTHO05D000019 1.4e-07 59.3 64 42.2
Rhsim10G0161100 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.4e-07 59.3 58 46.6
RhsimUnG0245600 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.4e-07 59.3 70 42.9
vmacro07508 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 1.4e-07 59.3 69 43.5
vmacro22387 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 1.4e-07 59.3 69 43.5
Actinidia09276 Actinidia chinensis HOM05D000056 ORTHO05D000019 1.9e-07 58.9 69 42.0
Dinv03858 Davidia involucrata HOM05D000056 ORTHO05D000019 1.9e-07 58.9 52 50.0
Sopen04g009870 Solanum pennellii HOM05D000056 ORTHO05D000019 1.9e-07 58.9 56 46.4
vmacro22385 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 1.9e-07 58.9 55 49.1
Nitab4.5_0003134g0020 Nicotiana tabacum HOM05D000056 ORTHO05D000019 4.1e-07 57.8 68 44.1
vmacro07823 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 4.1e-07 57.8 69 42.0
vmacro04967 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 9.2e-07 56.6 58 43.1
vmacro22389 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 9.2e-07 56.6 69 40.6
Cc00_g07890 Coffea canephora HOM05D000056 ORTHO05D000019 1.2e-06 56.2 59 49.2
Rhsim03G0059400 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.2e-06 56.2 69 43.5
MSTRG.24649 Avicennia marina HOM05D000056 ORTHO05D000019 2.0e-06 55.5 53 50.9
Rhsim03G0059100 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.0e-06 55.5 69 42.0
vmacro07509 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 2.0e-06 55.5 58 44.8
Solyc11g044380.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.7e-06 55.1 41 61.0
Aa31LG4G16100 Aethionema arabicum HOM05D000056 ORTHO05D000019 3.5e-06 54.7 67 37.3
Rhsim03G0059500 Rhododendron simsii HOM05D000056 ORTHO05D000019 4.6e-06 54.3 58 44.8
vmacro23055 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 4.6e-06 54.3 63 41.3


User provided reference genes

Program Settings