Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g078190.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 5.5e-116 421.0 218 100.0
Sopen03g020920 Solanum pennellii HOM05D015165 ORTHO05D017089 5.8e-73 278.1 154 89.0
Solyc10g075080.1 Solanum lycopersicum HOM05D015165 ORTHO05D011611 5.7e-28 128.6 109 56.0
CAN.G551.108 Capsicum annuum HOM05D002280 ORTHO05D011611 2.4e-26 123.2 219 38.8
PGSC0003DMG400036658 Solanum tuberosum HOM05D015165 ORTHO05D009935 3.9e-21 105.9 89 59.6
Solyc10g052680.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 8.8e-21 104.8 99 53.5
PGSC0003DMG400039945 Solanum tuberosum HOM05D015165 ORTHO05D017089 1.3e-19 100.9 129 45.0
CAN.G1463.3 Capsicum annuum HOM05D000479 ORTHO05D000007 6.3e-19 98.6 95 52.6
Sopen05g027740 Solanum pennellii HOM05D015165 ORTHO05D017089 3.5e-17 92.8 172 36.0
CANSAT01G0243 Cannabis sativa HOM05D000003 ORTHO05D000007 1.9e-15 87.0 103 38.8
CANSAT25G1254 Cannabis sativa HOM05D000003 ORTHO05D000007 1.9e-15 87.0 103 38.8
CAN.G265.4 Capsicum annuum HOM05D015165 ORTHO05D011611 2.7e-14 83.2 85 45.9
PGSC0003DMG400035899 Solanum tuberosum HOM05D000003 ORTHO05D000007 8.0e-14 81.6 64 57.8
Solyc09g059150.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 4.0e-13 79.3 216 34.7
CANSAT11G0526 Cannabis sativa HOM05D000003 ORTHO05D000007 6.7e-13 78.6 196 31.6
EL10As3g23356 Beta vulgaris HOM05D000003 ORTHO05D000007 4.4e-12 75.9 59 50.8
Nitab4.5_0000151g0420 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.3e-11 74.3 123 36.6
Hund31250 Selenicereus undatus HOM05D014118 ORTHO05D011611 1.7e-11 73.9 70 44.3
EL10Ac8g19497 Beta vulgaris HOM05D000003 ORTHO05D000007 6.3e-11 72.0 51 51.0
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 1.1e-10 71.2 61 49.2
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.8e-10 70.5 55 52.7
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 2.4e-10 70.1 55 45.5
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 2.4e-10 70.1 124 33.9
CANSAT65G0002 Cannabis sativa HOM05D000003 ORTHO05D000007 3.1e-10 69.7 70 44.3
Nitab4.5_0000151g0430 Nicotiana tabacum HOM05D000003 ORTHO05D011611 3.1e-10 69.7 115 33.9
EL10Ac1g02104 Beta vulgaris HOM05D000003 ORTHO05D011611 4.1e-10 69.3 61 44.3
CANSAT80G0090 Cannabis sativa HOM05D000003 ORTHO05D000007 5.3e-10 68.9 56 48.2
EL10Ac1g01965 Beta vulgaris HOM05D000003 ORTHO05D000007 7.0e-10 68.6 190 29.5
EL10Ac1g02040 Beta vulgaris HOM05D000003 ORTHO05D000007 9.1e-10 68.2 64 40.6
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 9.1e-10 68.2 56 46.4
Nitab4.5_0005442g0030 Nicotiana tabacum HOM05D000003 ORTHO05D011611 9.1e-10 68.2 116 37.1
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 1.6e-09 67.4 61 45.9
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 1.6e-09 67.4 55 49.1
Nitab4.5_0005640g0020 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.6e-09 67.4 120 31.7
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.6e-09 67.4 53 50.9
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 2.0e-09 67.0 190 29.5
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-09 66.6 189 29.1
Nitab4.5_0002525g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.7e-09 66.6 60 50.0
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 2.7e-09 66.6 56 44.6
Hund23554 Selenicereus undatus HOM05D000003 ORTHO05D011611 2.7e-09 66.6 132 33.3
CANSAT54G2202 Cannabis sativa HOM05D000003 ORTHO05D000007 4.5e-09 65.9 119 31.9
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 5.9e-09 65.5 110 30.0
Solyc05g010390.1 Solanum lycopersicum HOM05D029477 ORTHO05D017089 7.7e-09 65.1 79 41.8
Sopen05g006160 Solanum pennellii HOM05D000312 ORTHO05D011153 7.7e-09 65.1 81 42.0
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 1.0e-08 64.7 82 35.4
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-08 64.7 56 50.0
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-08 64.7 56 50.0
Hund15018 Selenicereus undatus HOM05D000185 ORTHO05D011611 1.0e-08 64.7 58 48.3
Ah.10g029790 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.3e-08 64.3 55 43.6
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-08 64.3 110 35.5
Nitab4.5_0004011g0050 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.3e-08 64.3 96 29.2
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 1.7e-08 63.9 51 45.1
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-08 63.5 228 22.8
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-08 63.5 199 26.1
Ah.11g040280 Amaranthus hybridus HOM05D000003 ORTHO05D011611 2.9e-08 63.2 55 43.6
Ah.13g067160 Amaranthus hybridus HOM05D017406 ORTHO05D000007 2.9e-08 63.2 66 40.9
EL10Ac6g14322 Beta vulgaris HOM05D000003 ORTHO05D000007 2.9e-08 63.2 204 27.0
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 2.9e-08 63.2 46 50.0
CANSAT01G1392 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-08 63.2 113 31.9
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 3.8e-08 62.8 233 24.5
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 3.8e-08 62.8 54 44.4
Ah.03g143450 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.0e-08 62.4 54 46.3
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 5.0e-08 62.4 198 26.8
CANSAT54G2645 Cannabis sativa HOM05D000003 ORTHO05D000007 5.0e-08 62.4 55 41.8
Ah.15g097110 Amaranthus hybridus HOM05D000003 ORTHO05D000007 6.5e-08 62.0 56 44.6
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 6.5e-08 62.0 63 44.4
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 6.5e-08 62.0 127 29.1
Ah.14g080910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 8.5e-08 61.6 56 42.9
CANSAT01G1178 Cannabis sativa HOM05D000003 ORTHO05D000007 8.5e-08 61.6 62 41.9
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-07 61.2 164 27.4
EL10Ac6g14808 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-07 60.8 57 38.6
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-07 60.8 55 41.8
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 1.9e-07 60.5 186 24.7
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 2.5e-07 60.1 61 44.3
CANSAT35G0925 Cannabis sativa HOM05D000003 ORTHO05D000007 2.5e-07 60.1 55 49.1
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.2e-07 59.7 51 51.0
Hund00727 Selenicereus undatus HOM05D063244 ORTHO05D011611 3.2e-07 59.7 68 39.7
EL10As3g23362 Beta vulgaris HOM05D000003 ORTHO05D000007 5.5e-07 58.9 44 47.7
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 7.2e-07 58.5 56 42.9
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 9.4e-07 58.2 56 41.1
EL10Ac3g06704 Beta vulgaris HOM05D000003 ORTHO05D000007 9.4e-07 58.2 177 23.7
Dinv44147 Davidia involucrata HOM05D000003 ORTHO05D000007 1.2e-06 57.8 81 33.3
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-06 57.4 216 24.1
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 2.1e-06 57.0 55 43.6
PGSC0003DMG400035714 Solanum tuberosum HOM05D029477 ORTHO05D017089 2.1e-06 57.0 97 39.2
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.6e-06 56.2 198 29.3
CANSAT25G2390 Cannabis sativa HOM05D000003 ORTHO05D011611 3.6e-06 56.2 56 41.1
Ah.02g122310 Amaranthus hybridus HOM05D000003 ORTHO05D000007 4.7e-06 55.8 49 49.0
EL10Ac1g01519 Beta vulgaris HOM05D000003 ORTHO05D000007 4.7e-06 55.8 48 41.7
Nitab4.5_0009247g0030 Nicotiana tabacum HOM05D029477 ORTHO05D017089 4.7e-06 55.8 130 33.1
Ah.12g061560 Amaranthus hybridus HOM05D000003 ORTHO05D000007 6.1e-06 55.5 63 41.3
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 8.0e-06 55.1 55 38.2


User provided reference genes

Program Settings