Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g077880.1 Solanum lycopersicum HOM05D000254 ORTHO05D000165 2.5e-45 184.9 83 100.0
arahy.Tifrunner.gnm1.ann1.B9TG8T Arachis hypogaea HOM05D000254 ORTHO05D000165 2.7e-15 85.1 100 45.0
CSS0014803 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.0e-14 81.6 101 44.6
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 4.0e-14 81.3 105 40.0
CSS0010411 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.2e-13 79.7 101 43.6
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 1.5e-13 79.3 105 40.0
Oeu055846.1 Olea europaea HOM05D000254 ORTHO05D000165 3.4e-13 78.2 103 41.7
Oeu056049.1 Olea europaea HOM05D000254 ORTHO05D000165 3.4e-13 78.2 105 39.0
CSS0044872 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.4e-13 77.8 103 40.8
Oeu028032.1 Olea europaea HOM05D000254 ORTHO05D000165 4.4e-13 77.8 105 40.0
Oeu001455.1 Olea europaea HOM05D000254 ORTHO05D000165 5.7e-13 77.4 105 39.0
Hund22241 Selenicereus undatus HOM05D000254 ORTHO05D000165 7.5e-13 77.0 103 39.8
Oeu018287.1 Olea europaea HOM05D000254 ORTHO05D000165 9.8e-13 76.6 105 38.1
arahy.Tifrunner.gnm1.ann1.H07TP5 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.3e-12 76.3 98 42.9
arahy.Tifrunner.gnm1.ann1.HH8KKF Arachis hypogaea HOM05D000254 ORTHO05D000165 1.7e-12 75.9 98 43.9
arahy.Tifrunner.gnm1.ann1.4IK5SR Arachis hypogaea HOM05D000254 ORTHO05D000165 2.2e-12 75.5 87 47.1
Oeu040797.1 Olea europaea HOM05D000254 ORTHO05D000165 2.2e-12 75.5 105 38.1
arahy.Tifrunner.gnm1.ann1.Q3MTCJ Arachis hypogaea HOM05D000254 ORTHO05D000165 2.8e-12 75.1 98 42.9
arahy.Tifrunner.gnm1.ann1.T4IM50 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.8e-12 75.1 98 42.9
CSS0007203 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.8e-12 74.3 101 42.6
Oeu003336.1 Olea europaea HOM05D000254 ORTHO05D000165 4.8e-12 74.3 105 38.1
arahy.Tifrunner.gnm1.ann1.A30LRN Arachis hypogaea HOM05D000254 ORTHO05D000165 6.3e-12 73.9 98 42.9
CSS0009137 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.1e-11 73.2 101 40.6
Oeu003644.1 Olea europaea HOM05D000254 ORTHO05D000165 1.4e-11 72.8 105 36.2
Hund26328 Selenicereus undatus HOM05D000254 ORTHO05D000165 1.4e-11 72.8 103 37.9
CSS0045922 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.4e-11 72.0 103 39.8
TWI31G0240 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.4e-11 72.0 104 36.5
TWI31G1367 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.4e-11 72.0 104 36.5
Thhalv10023173m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.1e-11 71.6 103 35.9
PGR142G1242 Punica granatum HOM05D000254 ORTHO05D000165 4.1e-11 71.2 101 39.6
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 9.1e-11 70.1 101 36.6
Glyma.19G047200 Glycine max HOM05D000254 ORTHO05D000165 1.2e-10 69.7 103 38.8
Thhalv10023932m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.6e-10 69.3 100 36.0
AT1G19260 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 2.7e-10 68.6 104 38.5
THA.LOC104827361 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 2.7e-10 68.6 99 36.4
Thhalv10012204m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.5e-10 67.8 103 35.9
TWI15G1142 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 4.5e-10 67.8 104 36.5
arahy.Tifrunner.gnm1.ann1.XB47SY Arachis hypogaea HOM05D000254 ORTHO05D000165 5.9e-10 67.4 70 51.4
arahy.Tifrunner.gnm1.ann1.ZHV4UG Arachis hypogaea HOM05D000254 ORTHO05D000165 5.9e-10 67.4 87 43.7
CANSAT78G1301 Cannabis sativa HOM05D000254 ORTHO05D000165 5.9e-10 67.4 101 34.7
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.9e-10 67.4 101 34.7
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.0e-09 66.6 101 35.6
CSS0026480 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.3e-09 66.2 76 46.1
Thhalv10028046m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.3e-09 66.2 99 35.4
TWI14G0501 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.3e-09 66.2 100 36.0
CSS0027448 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.7e-09 65.9 83 41.0
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 1.7e-09 65.9 106 34.0
Thhalv10019469m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.2e-09 65.5 103 35.0
PSO339G4772 Papaver somniferum HOM05D000254 ORTHO05D000165 2.2e-09 65.5 93 37.6
PSO782G1022 Papaver somniferum HOM05D000254 ORTHO05D000165 2.9e-09 65.1 86 39.5
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 3.8e-09 64.7 103 36.9
TWI73G1180 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.8e-09 64.7 91 33.0
Thhalv10002288m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 5.0e-09 64.3 100 36.0
Thhalv10015783m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 5.0e-09 64.3 103 35.0
Oeu046850.1 Olea europaea HOM05D000254 ORTHO05D000165 5.0e-09 64.3 103 35.0
RcHm_v2.0_Chr3g0453661 Rosa chinensis HOM05D000254 ORTHO05D000165 5.0e-09 64.3 101 33.7
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.5e-09 63.5 88 37.5
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.5e-09 63.5 90 40.0
FvH4_3g23261 Fragaria vesca HOM05D000254 ORTHO05D000165 8.5e-09 63.5 101 35.6
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-08 63.2 101 35.6
CANSAT54G0894 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-08 63.2 101 35.6
PSO063G1384 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-08 63.2 96 34.4
PSO675G0288 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-08 63.2 96 34.4
PSO765G0063 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-08 63.2 96 34.4
TPR.G208 Trifolium pratense HOM05D000254 ORTHO05D000165 1.1e-08 63.2 103 35.9
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.1e-08 63.2 93 37.6
AT4G09660 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 1.5e-08 62.8 105 35.2
arahy.Tifrunner.gnm1.ann1.2YU2KA Arachis hypogaea HOM05D000254 ORTHO05D000165 1.5e-08 62.8 77 46.8
Ciclev10018973m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.5e-08 62.8 97 38.1
Ciclev10024121m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.5e-08 62.8 98 37.8
Thhalv10024135m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.5e-08 62.8 103 34.0
Ciclev10023755m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.9e-08 62.4 103 35.0
Oeu029385.1 Olea europaea HOM05D000254 ORTHO05D000165 1.9e-08 62.4 100 35.0
CSS0016798 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-08 62.0 82 41.5
Glyma.16G122000 Glycine max HOM05D000254 ORTHO05D000165 2.5e-08 62.0 103 35.9
SGA_v2.0_scaffold19G08785 Striga asiatica HOM05D000254 ORTHO05D000165 2.5e-08 62.0 100 34.0
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.2e-08 61.6 101 33.7
Oeu004087.1 Olea europaea HOM05D000254 ORTHO05D000165 3.2e-08 61.6 95 35.8
Oeu004483.1 Olea europaea HOM05D000254 ORTHO05D000165 3.2e-08 61.6 95 35.8
Oeu007944.1 Olea europaea HOM05D000254 ORTHO05D000165 4.2e-08 61.2 95 34.7
Oeu020155.1 Olea europaea HOM05D000254 ORTHO05D000165 4.2e-08 61.2 95 34.7
Oeu024488.1 Olea europaea HOM05D000254 ORTHO05D000165 4.2e-08 61.2 95 33.7
THA.LOC104799914 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 4.2e-08 61.2 99 34.3
arahy.Tifrunner.gnm1.ann1.9Z3MNM Arachis hypogaea HOM05D000254 ORTHO05D000165 5.5e-08 60.8 77 45.5
PSO384G2300 Papaver somniferum HOM05D000254 ORTHO05D000165 5.5e-08 60.8 93 35.5
Oeu007107.1 Olea europaea HOM05D000254 ORTHO05D000165 7.2e-08 60.5 95 35.8
CARHR216170 Cardamine hirsuta HOM05D000254 ORTHO05D000165 9.4e-08 60.1 105 36.2
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 9.4e-08 60.1 101 33.7
Oeu026773.1 Olea europaea HOM05D000254 ORTHO05D000165 9.4e-08 60.1 95 34.7
Oeu053798.1 Olea europaea HOM05D000254 ORTHO05D000165 9.4e-08 60.1 95 34.7
SGA_v2.0_scaffold8G04504 Striga asiatica HOM05D000254 ORTHO05D000165 9.4e-08 60.1 101 31.7
SGA_v2.0_scaffold38G15060 Striga asiatica HOM05D000254 ORTHO05D000165 1.2e-07 59.7 101 31.7
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-07 59.3 90 36.7
Thhalv10002275m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.1e-07 58.9 103 31.1
Oeu015148.1 Olea europaea HOM05D000254 ORTHO05D000165 2.7e-07 58.5 95 33.7
Oeu059068.1 Olea europaea HOM05D000254 ORTHO05D000165 3.6e-07 58.2 88 37.5
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 3.6e-07 58.2 101 36.6
arahy.Tifrunner.gnm1.ann1.TS5WSI Arachis hypogaea HOM05D000254 ORTHO05D000165 4.7e-07 57.8 77 42.9
ECA238G3762 Erigeron canadensis HOM05D000254 ORTHO05D000165 4.7e-07 57.8 93 35.5
Hund04498 Selenicereus undatus HOM05D000254 ORTHO05D000165 4.7e-07 57.8 91 35.2
SGA_v2.0_scaffold219G42580 Striga asiatica HOM05D000254 ORTHO05D000165 4.7e-07 57.8 101 30.7
Oeu014787.1 Olea europaea HOM05D000254 ORTHO05D000165 6.1e-07 57.4 95 34.7
Aqoxy4G01821 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 8.0e-07 57.0 101 32.7
Oeu037332.1 Olea europaea HOM05D000254 ORTHO05D000165 8.0e-07 57.0 95 35.8
PSO832G3724 Papaver somniferum HOM05D000254 ORTHO05D000165 8.0e-07 57.0 74 37.8
Thhalv10001868m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 1.0e-06 56.6 95 33.7
PSO782G1155 Papaver somniferum HOM05D000254 ORTHO05D000165 1.0e-06 56.6 93 33.3
Ciclev10010383m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.4e-06 56.2 101 30.7
arahy.Tifrunner.gnm1.ann1.REY47L Arachis hypogaea HOM05D000254 ORTHO05D000165 1.8e-06 55.8 72 43.1
Thhalv10027556m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 2.3e-06 55.5 98 31.6
Hund22477 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.3e-06 55.5 101 29.7
Hund22828 Selenicereus undatus HOM05D000254 ORTHO05D000165 2.3e-06 55.5 101 29.7
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 3.0e-06 55.1 98 30.6
AT2G06541 Arabidopsis thaliana HOM05D000254 ORTHO05D000165 4.0e-06 54.7 95 34.7
Oeu040560.1 Olea europaea HOM05D000254 ORTHO05D000165 4.0e-06 54.7 100 34.0
BolC2t08734H Brassica oleracea HOM05D000254 ORTHO05D000165 5.2e-06 54.3 98 31.6
BolC4t24868H Brassica oleracea HOM05D000254 ORTHO05D000165 5.2e-06 54.3 103 31.1
CARHR293270 Cardamine hirsuta HOM05D000254 ORTHO05D000165 5.2e-06 54.3 96 35.4
Thhalv10012261m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 5.2e-06 54.3 79 38.0
Oeu016858.1 Olea europaea HOM05D000254 ORTHO05D000165 5.2e-06 54.3 100 34.0
Ciclev10006621m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.8e-06 53.5 92 35.9
Oeu023369.1 Olea europaea HOM05D000254 ORTHO05D000165 8.8e-06 53.5 95 33.7
TPR.G8984 Trifolium pratense HOM05D000254 ORTHO05D000165 8.8e-06 53.5 98 32.7


User provided reference genes

Program Settings