Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.8e-118 426.8 211 100.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-45 186.8 197 47.7
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.7e-42 174.5 171 49.7
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.0e-39 164.5 163 50.9
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-33 147.1 205 44.4
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-30 137.1 129 51.9
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-29 134.0 120 55.8
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.8e-29 132.5 129 50.4
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.1e-28 131.0 100 63.0
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-28 130.6 148 42.6
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-28 129.0 172 37.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-28 127.9 172 40.1
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-27 126.7 138 42.8
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-27 126.3 101 72.3
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-26 123.6 189 37.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-25 120.9 125 43.2
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.6e-25 119.8 78 76.9
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 2.8e-24 116.3 138 39.9
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-23 114.0 219 32.4
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.3e-23 112.1 170 40.6
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.1e-23 111.3 235 29.8
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.5e-20 102.1 205 29.3
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 7.2e-20 101.7 181 32.0
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 2.3e-18 96.7 239 26.4
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 3.0e-18 96.3 84 53.6
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-17 94.4 203 30.0
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-17 94.4 92 50.0
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-17 92.8 93 46.2
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-17 92.8 129 38.8
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-17 92.8 80 57.5
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-17 92.8 94 44.7
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-17 92.4 129 38.8
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-16 90.5 76 57.9
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-16 90.5 93 49.5
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 4.8e-16 89.0 68 54.4
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-15 87.8 148 32.4
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.8e-15 87.0 52 69.2
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 7.0e-15 85.1 139 33.1
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 2.0e-14 83.6 208 28.4
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-14 81.6 119 33.6
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 7.7e-14 81.6 89 47.2
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 1.3e-13 80.9 78 48.7
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-13 80.5 92 46.7
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-13 79.3 202 27.2
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 5.0e-13 79.0 207 26.1
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 5.0e-13 79.0 62 54.8
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.0e-13 79.0 80 47.5
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.0e-13 79.0 104 37.5
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-12 77.8 105 41.9
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.5e-12 77.4 68 54.4
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-12 77.4 76 48.7
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-12 77.0 207 26.6
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-12 76.3 87 44.8
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-11 74.3 81 45.7
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 2.7e-11 73.2 205 25.4
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 3.6e-11 72.8 58 56.9
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-11 72.4 61 55.7
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 8.0e-11 71.6 81 44.4
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.0e-10 71.2 248 24.6
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.0e-10 71.2 248 24.6
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 1.8e-10 70.5 247 23.5
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-10 69.7 196 26.0
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-10 69.7 125 31.2
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 4.0e-10 69.3 59 55.9
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-10 69.3 99 36.4
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 5.2e-10 68.9 145 28.3
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 5.2e-10 68.9 175 27.4
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 8.8e-10 68.2 52 57.7
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.8e-10 68.2 66 47.0
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-09 67.4 148 29.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 2.0e-09 67.0 90 35.6
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 4.4e-09 65.9 83 42.2
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 4.4e-09 65.9 66 43.9
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 7.5e-09 65.1 66 45.5
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.7e-08 63.9 247 22.7
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-08 63.9 53 54.7
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.7e-08 63.9 53 54.7
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-08 63.5 244 22.1
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 2.8e-08 63.2 242 22.3
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.8e-08 63.2 66 45.5
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-08 62.8 91 35.2
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-08 62.8 66 42.4
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 4.8e-08 62.4 78 42.3
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.8e-08 62.4 75 42.7
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 6.3e-08 62.0 76 40.8
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.3e-08 61.6 107 35.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-07 61.2 61 45.9
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 1.4e-07 60.8 161 28.0
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.8e-07 60.5 62 45.2
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-07 60.1 197 24.4
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.4e-07 60.1 244 20.5
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.4e-07 60.1 123 30.1
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 2.4e-07 60.1 78 41.0
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-07 59.7 197 24.4
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-07 59.7 58 50.0
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-07 59.7 74 41.9
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-07 59.3 62 43.5
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 5.4e-07 58.9 78 42.3
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 7.0e-07 58.5 216 23.1
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.0e-07 58.5 71 43.7
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 9.1e-07 58.2 67 40.3
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.1e-07 58.2 77 40.3
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-06 57.8 76 39.5
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-06 57.8 81 35.8
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-06 57.4 70 41.4
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-06 57.4 65 40.0
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-06 57.0 48 52.1
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-06 56.6 218 22.5
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 3.5e-06 56.2 216 22.7
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-06 56.2 65 41.5
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-06 55.8 57 47.4
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 106 30.2
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-06 55.5 71 40.8


User provided reference genes

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