Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 4.7e-213 744.2 358 100.0
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.2e-210 735.3 358 98.0
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 4.9e-202 707.6 361 94.7
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.8e-196 689.1 361 92.2
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.2e-195 686.4 361 90.3
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 7.5e-187 657.1 361 85.9
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 2.2e-186 655.6 361 85.0
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 2.9e-186 655.2 361 86.1
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.9e-185 652.5 361 85.0
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 4.1e-185 651.4 359 84.7
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 4.1e-185 651.4 361 84.8
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 4.1e-185 651.4 361 85.3
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.6e-184 649.4 361 83.4
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.7e-184 648.7 361 84.8
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.7e-184 648.7 361 84.5
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 2.7e-184 648.7 361 84.5
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 3.5e-184 648.3 360 85.3
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 7.8e-184 647.1 361 84.2
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.3e-183 645.6 359 85.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 2.3e-183 645.6 361 84.5
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 2.3e-183 645.6 361 84.2
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 3.9e-183 644.8 361 84.5
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 5.1e-183 644.4 358 84.6
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 8.6e-183 643.7 361 84.2
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.1e-182 643.3 358 84.4
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.9e-182 642.5 361 83.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 1.9e-182 642.5 361 83.7
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.9e-182 642.5 361 83.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.5e-182 642.1 361 83.9
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.3e-182 641.3 357 84.9
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 9.5e-182 640.2 361 83.1
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 2.1e-181 639.0 359 83.0
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 3.6e-181 638.3 361 83.4
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.8e-180 636.0 361 82.8
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 4.0e-180 634.8 361 81.7
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 4.0e-180 634.8 362 83.4
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 5.2e-180 634.4 361 83.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 5.2e-180 634.4 361 82.3
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 6.8e-180 634.0 361 82.0
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 2.0e-179 632.5 361 80.6
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.0e-179 632.5 371 81.9
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.6e-179 632.1 361 82.3
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 3.4e-179 631.7 387 78.0
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 3.4e-179 631.7 359 83.8
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 4.4e-179 631.3 361 83.7
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 5.8e-179 630.9 361 82.0
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 9.9e-179 630.2 361 80.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 2.2e-178 629.0 361 82.0
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 6.4e-178 627.5 360 81.7
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 8.4e-178 627.1 359 82.7
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 2.4e-177 625.5 360 81.9
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 2.4e-177 625.5 358 81.6
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 7.1e-177 624.0 361 82.0
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 7.1e-177 624.0 357 82.4
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 9.2e-177 623.6 359 80.8
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.7e-176 622.1 360 82.2
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 4.6e-176 621.3 360 82.2
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.6e-176 621.3 360 82.2
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.0e-175 620.2 360 81.9
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 6.6e-175 617.5 396 75.8
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 1.5e-174 616.3 358 81.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.9e-174 615.9 361 80.1
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 4.3e-174 614.8 360 81.4
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 7.3e-174 614.0 361 80.3
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 9.6e-174 613.6 360 81.4
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.6e-173 612.8 359 79.4
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 6.2e-173 610.9 400 74.2
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.1e-172 610.1 428 70.6
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 5.2e-172 607.8 359 78.8
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 3.4e-171 605.1 359 78.0
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 3.4e-171 605.1 417 72.2
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.3e-170 603.2 339 83.5
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 3.8e-170 601.7 359 77.7
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 4.9e-170 601.3 359 78.6
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 8.4e-170 600.5 360 80.3
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.1e-169 600.1 357 79.8
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 5.4e-169 597.8 359 76.6
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 7.1e-169 597.4 359 76.9
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 7.1e-169 597.4 359 76.9
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 7.1e-169 597.4 359 76.9
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 9.3e-169 597.0 359 76.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.1e-168 595.9 387 73.9
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 8.7e-167 590.5 357 76.5
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.1e-166 590.1 357 77.6
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 1.1e-166 590.1 359 78.3
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.3e-165 586.6 361 79.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.8e-165 585.5 359 75.5
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 4.8e-165 584.7 359 75.5
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 8.1e-165 583.9 358 75.7
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.1e-164 583.6 359 75.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.4e-164 583.2 361 75.1
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 2.4e-164 582.4 361 75.1
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 1.9e-161 572.8 357 75.6
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 5.4e-161 571.2 313 85.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 2.1e-160 569.3 366 72.7
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.0e-159 567.0 366 72.1
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 9.6e-150 533.9 336 74.4
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 9.6e-150 533.9 302 84.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 8.2e-149 530.8 306 82.7
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 3.1e-148 528.9 311 80.7
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.0e-143 513.8 357 69.5
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.2e-141 506.1 357 66.9
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.4e-140 502.7 357 66.1
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 6.9e-140 501.1 403 63.5
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 2.0e-139 499.6 352 71.3
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 6.5e-138 494.6 358 66.2
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.0e-135 487.3 358 69.0
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.5e-126 456.8 252 85.3
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 3.7e-125 452.2 368 60.9
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 1.1e-124 450.7 240 89.2
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.3e-124 448.4 364 63.5
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 3.6e-112 409.1 238 81.9
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 6.1e-104 381.7 211 84.4
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.0e-99 366.7 205 83.9
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 5.0e-74 282.3 184 75.5
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 4.0e-63 246.1 152 75.7
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.5e-59 233.0 154 73.4
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 7.1e-52 208.8 119 78.2
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 3.5e-51 206.5 126 76.2
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 6.2e-48 195.7 319 38.9
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 2.0e-46 190.7 207 50.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 6.2e-40 169.1 98 84.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 1.1e-33 148.3 117 65.8
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 2.2e-24 117.5 59 88.1
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 5.9e-22 109.4 111 52.3
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.2e-19 101.7 79 67.1
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 8.2e-16 89.0 51 72.5
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.8e-13 80.1 166 34.9
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 3.8e-13 80.1 37 89.2
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 2.6e-06 57.4 185 28.1


User provided reference genes

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