Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g059170.2 Solanum lycopersicum HOM05D005635 ORTHO05D006838 2.2e-61 238.8 124 100.0
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 8.4e-61 236.9 123 100.0
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 1.4e-55 219.5 123 90.2
Nitab4.5_0000064g0020 Nicotiana tabacum HOM05D005635 ORTHO05D006838 3.8e-53 211.5 125 88.0
Nitab4.5_0002913g0010 Nicotiana tabacum HOM05D005635 ORTHO05D006838 1.1e-52 209.9 125 87.2
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 2.5e-41 172.2 124 70.2
Cc03_g14460 Coffea canephora HOM05D005635 ORTHO05D006838 4.3e-41 171.4 124 71.8
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 4.3e-41 171.4 124 75.0
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 7.4e-41 170.6 125 73.6
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 1.7e-40 169.5 124 71.0
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 1.7e-40 169.5 124 70.2
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 1.8e-39 166.0 123 70.7
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 3.1e-39 165.2 124 69.4
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 4.1e-39 164.9 123 67.5
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 9.1e-39 163.7 124 70.2
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 1.2e-38 163.3 124 71.8
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 2.0e-38 162.5 124 70.2
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 2.6e-38 162.2 123 68.3
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 2.6e-38 162.2 123 68.3
HanXRQChr02g0059091 Helianthus annuus HOM05D005635 ORTHO05D006838 4.5e-38 161.4 124 69.4
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 4.5e-38 161.4 123 65.0
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 7.7e-38 160.6 116 71.6
Atru.chr4.1498 Acer truncatum HOM05D005635 ORTHO05D006838 1.0e-37 160.2 124 66.1
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 1.3e-37 159.8 124 68.5
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 1.3e-37 159.8 124 66.1
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 2.2e-37 159.1 124 65.3
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 2.9e-37 158.7 124 66.1
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 3.8e-37 158.3 123 67.5
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 6.5e-37 157.5 123 66.7
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 8.5e-37 157.1 124 65.3
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 1.1e-36 156.8 124 64.5
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 1.9e-36 156.0 123 65.9
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 1.9e-36 156.0 125 65.6
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 3.2e-36 155.2 124 64.5
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 3.2e-36 155.2 124 67.7
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 4.2e-36 154.8 125 66.4
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 4.2e-36 154.8 124 63.7
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 4.2e-36 154.8 117 69.2
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 5.5e-36 154.5 124 66.1
ECA233G1690 Erigeron canadensis HOM05D005635 ORTHO05D006838 7.2e-36 154.1 124 66.1
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 9.4e-36 153.7 124 66.1
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 9.4e-36 153.7 115 72.2
Potri.019G095833 Populus trichocarpa HOM05D005635 ORTHO05D006838 9.4e-36 153.7 123 61.8
SalBow7G2884 Salvia bowleyana HOM05D005635 ORTHO05D006838 1.6e-35 152.9 124 64.5
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 2.1e-35 152.5 124 64.5
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 2.1e-35 152.5 132 62.9
Potri.019G097901 Populus trichocarpa HOM05D005635 ORTHO05D006838 2.7e-35 152.1 123 63.4
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 3.6e-35 151.8 124 65.3
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 4.7e-35 151.4 123 62.6
Lsat_1_v5_gn_6_67720 Lactuca sativa HOM05D005635 ORTHO05D006838 4.7e-35 151.4 123 65.9
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 6.1e-35 151.0 126 66.7
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 6.1e-35 151.0 124 62.9
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 6.1e-35 151.0 124 65.3
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 6.1e-35 151.0 123 65.0
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 7.9e-35 150.6 117 68.4
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 1.0e-34 150.2 126 66.7
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 1.4e-34 149.8 126 66.7
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 1.8e-34 149.4 124 64.5
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 1.8e-34 149.4 109 74.3
Carub.0005s2650 Capsella rubella HOM05D005635 ORTHO05D006838 5.1e-34 147.9 126 65.1
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 5.1e-34 147.9 133 63.9
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 5.1e-34 147.9 115 67.8
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 6.7e-34 147.5 118 66.1
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 6.7e-34 147.5 128 64.8
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 8.8e-34 147.1 118 65.3
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 8.8e-34 147.1 124 63.7
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 1.1e-33 146.7 117 67.5
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 1.1e-33 146.7 116 65.5
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 2.6e-33 145.6 127 63.8
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 2.6e-33 145.6 127 63.8
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 4.4e-33 144.8 123 62.6
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 9.7e-33 143.7 123 62.6
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 1.3e-32 143.3 129 62.8
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 1.3e-32 143.3 122 63.9
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 1.7e-32 142.9 97 73.2
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 2.8e-32 142.1 125 62.4
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 8.2e-32 140.6 124 65.3
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 1.1e-31 140.2 114 66.7
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 1.1e-31 140.2 117 62.4
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 1.4e-31 139.8 107 67.3
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 2.4e-31 139.0 118 66.1
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 4.1e-31 138.3 124 60.5
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 5.3e-31 137.9 125 64.0
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 2.0e-30 136.0 109 65.1
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 3.5e-30 135.2 123 60.2
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 4.5e-30 134.8 123 60.2
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 4.5e-30 134.8 123 60.2
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 2.5e-28 129.0 105 69.5
HPP92_007033 Vanilla planifolia HOM05D005635 ORTHO05D006838 2.5e-28 129.0 97 66.0
HPP92_007065 Vanilla planifolia HOM05D005635 ORTHO05D006838 4.2e-28 128.3 97 66.0
Os01g0896500 Oryza sativa ssp. japonica HOM05D005635 ORTHO05D006838 2.1e-27 125.9 101 63.4
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 3.6e-27 125.2 88 67.0
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 2.3e-26 122.5 135 56.3
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 2.3e-26 122.5 109 57.8
TPR.G35147 Trifolium pratense HOM05D005635 ORTHO05D006838 4.0e-26 121.7 91 72.5
VMungo1127G1500 Vigna mungo HOM05D005635 ORTHO05D006838 3.1e-23 112.1 84 69.0
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 1.2e-22 110.2 89 62.9
SEGI_21812 Sequoiadendron giganteum HOM05D005635 ORTHO05D006838 3.8e-21 105.1 108 52.8
Oeu023600.1 Olea europaea HOM05D005635 ORTHO05D006838 9.4e-20 100.5 77 76.6
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 1.0e-18 97.1 225 32.4
C08p34730 Brassica napus HOM05D005635 ORTHO05D006838 2.3e-18 95.9 105 55.2
Mapoly0056s0110 Marchantia polymorpha HOM05D005635 ORTHO05D006838 1.2e-17 93.6 126 43.7
Pp3c5_10150 Physcomitrium patens HOM05D005635 ORTHO05D006838 1.1e-15 87.0 123 42.3
BolC8t51075H Brassica oleracea HOM05D005635 ORTHO05D006838 4.1e-15 85.1 88 54.5
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 3.2e-12 75.5 45 75.6
PGR044G0369 Punica granatum HOM05D005635 ORTHO05D006838 7.2e-12 74.3 63 69.8
BcaC07g40503 Brassica carinata HOM05D005635 ORTHO05D006838 9.4e-12 73.9 56 69.6
Dinv18319 Davidia involucrata HOM05D005635 ORTHO05D006838 1.6e-11 73.2 46 67.4
Prupe.7G266600 Prunus persica HOM05D005635 ORTHO05D006838 2.7e-11 72.4 45 68.9
CBR_g30747 Chara braunii HOM05D005635 ORTHO05D006838 2.3e-10 69.3 95 38.9
BcaC07g40447 Brassica carinata HOM05D005635 ORTHO05D006838 6.8e-10 67.8 58 65.5
BcaB02g07446 Brassica carinata HOM05D000137 ORTHO05D021629 8.8e-10 67.4 50 66.0


User provided reference genes

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