Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g059140.4 Solanum lycopersicum HOM05D002530 ORTHO05D002802 4.4e-21 103.6 49 100.0
PGSC0003DMG400008528 Solanum tuberosum HOM05D002530 ORTHO05D002802 2.5e-16 87.8 43 93.0
Peaxi162Scf00883g00321 Petunia axillaris HOM05D002530 ORTHO05D002802 3.4e-13 77.4 43 81.4
CAN.G1891.13 Capsicum annuum HOM05D002530 ORTHO05D002802 2.2e-12 74.7 43 79.1
CAN.G4601.1 Capsicum annuum HOM05D002530 ORTHO05D002802 2.2e-12 74.7 43 79.1
Nitab4.5_0002913g0020 Nicotiana tabacum HOM05D002530 ORTHO05D002802 4.1e-11 70.5 43 74.4
Nitab4.5_0000064g0010 Nicotiana tabacum HOM05D002530 ORTHO05D002802 9.2e-11 69.3 43 74.4
CAN.G694.45 Capsicum annuum HOM05D002530 ORTHO05D002802 2.3e-09 64.7 67 52.2
Cc03_g14450 Coffea canephora HOM05D002530 ORTHO05D002802 1.9e-08 61.6 41 73.2
SalBow6G6351 Salvia bowleyana HOM05D002530 ORTHO05D002802 7.3e-08 59.7 41 68.3
Atru.chr4.1470 Acer truncatum HOM05D002530 ORTHO05D002802 9.5e-08 59.3 44 65.9
Atru.chr4.1497 Acer truncatum HOM05D002530 ORTHO05D002802 9.5e-08 59.3 44 65.9
Migut.N03055 Erythranthe guttata HOM05D002530 ORTHO05D002802 1.2e-07 58.9 43 65.1
TAR633G2324 Trochodendron aralioides HOM05D002530 ORTHO05D002802 1.2e-07 58.9 41 68.3
Oeu024468.1 Olea europaea HOM05D002530 ORTHO05D002802 1.6e-07 58.5 41 65.9
Hma1.2p1_1156F.1_g262320 Hydrangea macrophylla HOM05D002530 ORTHO05D002802 2.1e-07 58.2 41 68.3
Migut.O00693 Erythranthe guttata HOM05D002530 ORTHO05D002802 2.8e-07 57.8 43 62.8
GSVIVG01038181001 Vitis vinifera HOM05D002530 ORTHO05D002802 2.8e-07 57.8 41 63.4
CSS0004772 Camellia sinensis var. sinensis HOM05D002530 ORTHO05D002802 3.6e-07 57.4 48 58.3
CSS0008293 Camellia sinensis var. sinensis HOM05D002530 ORTHO05D002802 3.6e-07 57.4 48 58.3
MBI07_g11510_MAGBIO Magnolia biondii HOM05D002530 ORTHO05D002802 4.7e-07 57.0 43 62.8
Sabra19G0108700 Salix brachista HOM05D002530 ORTHO05D002802 4.7e-07 57.0 37 70.3
Rhsim02G0085600 Rhododendron simsii HOM05D002530 ORTHO05D002802 6.2e-07 56.6 44 56.8
Lj6C228T6 Lonicera japonica HOM05D002530 ORTHO05D002802 8.1e-07 56.2 47 57.4
Lj6A232T33 Lonicera japonica HOM05D002530 ORTHO05D002802 1.1e-06 55.8 47 57.4
MELO3C011849.2 Cucumis melo HOM05D002530 ORTHO05D002802 1.4e-06 55.5 43 60.5
Potri.019G097000 Populus trichocarpa HOM05D002530 ORTHO05D002802 1.4e-06 55.5 35 71.4
Actinidia11439 Actinidia chinensis HOM05D002530 ORTHO05D002802 1.8e-06 55.1 46 56.5
CSS0022709 Camellia sinensis var. sinensis HOM05D002530 ORTHO05D002802 1.8e-06 55.1 42 64.3
ClCG11G013480 Citrullus lanatus HOM05D002530 ORTHO05D002802 1.8e-06 55.1 43 60.5
Prupe.1G102500 Prunus persica HOM05D002530 ORTHO05D002802 1.8e-06 55.1 43 58.1
vmacro15696 Vaccinium macrocarpon HOM05D002530 ORTHO05D002802 1.8e-06 55.1 36 63.9
arahy.Tifrunner.gnm1.ann1.PUPF9M Arachis hypogaea HOM05D002530 ORTHO05D002802 2.3e-06 54.7 35 68.6
RhsimUnG0015100 Rhododendron simsii HOM05D002530 ORTHO05D002802 3.1e-06 54.3 32 68.8
Thecc.04G163700 Theobroma cacao HOM05D002530 ORTHO05D002802 3.1e-06 54.3 35 65.7
Aqoxy5G00355 Aquilegia oxysepala HOM05D002530 ORTHO05D002802 4.0e-06 53.9 41 61.0
Duzib268G0824 Durio zibethinus HOM05D002530 ORTHO05D002802 4.0e-06 53.9 43 58.1
Medtr7g117580 Medicago truncatula HOM05D002530 ORTHO05D002802 4.0e-06 53.9 43 53.5
CsaV3_5G030110 Cucumis sativus L. HOM05D002530 ORTHO05D002802 5.2e-06 53.5 35 65.7
MD00G1064100 Malus domestica HOM05D002530 ORTHO05D002802 5.2e-06 53.5 43 55.8
RcHm_v2.0_Chr4g0405621 Rosa chinensis HOM05D002530 ORTHO05D002802 5.2e-06 53.5 43 58.1
arahy.Tifrunner.gnm1.ann1.XB6ANN Arachis hypogaea HOM05D002530 ORTHO05D002802 6.8e-06 53.1 35 65.7
Ciclev10018782m.g Citrus clementina HOM05D002530 ORTHO05D002802 6.8e-06 53.1 41 63.4
Lj1g0001992 Lotus japonicus HOM05D002530 ORTHO05D002802 6.8e-06 53.1 43 55.8
Dinv33216 Davidia involucrata HOM05D002530 ORTHO05D002802 8.9e-06 52.8 47 55.3
PGR142G2077 Punica granatum HOM05D002530 ORTHO05D002802 8.9e-06 52.8 35 65.7


User provided reference genes

Program Settings