Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g058330.3 Solanum lycopersicum HOM05D003436 ORTHO05D003674 3.7e-52 208.0 109 100.0
Sopen03g011930 Solanum pennellii HOM05D003436 ORTHO05D003674 6.9e-51 203.8 109 98.2
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.6e-23 112.8 158 52.5
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 2.0e-21 105.9 158 48.1
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 7.5e-21 104.0 138 50.0
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.8e-19 99.4 144 51.4
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 1.7e-17 92.8 143 48.3
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 6.6e-17 90.9 158 45.6
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 9.5e-16 87.0 128 47.7
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.6e-15 86.3 143 45.5
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 4.7e-15 84.7 143 44.8
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 6.1e-15 84.3 167 40.1
Lsat_1_v5_gn_5_146120 Lactuca sativa HOM05D003436 ORTHO05D003674 1.8e-14 82.8 69 62.3
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 6.8e-14 80.9 149 42.3
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 6.8e-14 80.9 154 39.6
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 1.5e-13 79.7 172 37.8
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 2.0e-13 79.3 161 42.9
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 3.4e-13 78.6 136 43.4
Sc19g0007020 Simmondsia chinensis HOM05D003436 ORTHO05D003674 4.4e-13 78.2 105 47.6
HanXRQChr02g0048381 Helianthus annuus HOM05D003436 ORTHO05D003674 9.8e-13 77.0 98 52.0
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 1.3e-12 76.6 146 41.1
Lsat_1_v5_gn_8_74401 Lactuca sativa HOM05D003436 ORTHO05D003674 2.9e-12 75.5 69 58.0
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 4.9e-12 74.7 146 41.8
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 8.3e-12 73.9 159 38.4
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 4.1e-11 71.6 169 37.3
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 5.4e-11 71.2 153 42.5
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 7.0e-11 70.9 139 39.6
Dinv24076 Davidia involucrata HOM05D003436 ORTHO05D003674 9.2e-11 70.5 103 47.6
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 1.6e-10 69.7 152 42.1
arahy.Tifrunner.gnm1.ann1.6M6V4C Arachis hypogaea HOM05D003436 ORTHO05D003674 1.6e-10 69.7 149 38.9
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 4.6e-10 68.2 151 41.7
TPR.G27779 Trifolium pratense HOM05D003436 ORTHO05D003674 4.6e-10 68.2 57 64.9
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 6.0e-10 67.8 146 40.4
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 7.8e-10 67.4 143 43.4
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 1.0e-09 67.0 152 35.5
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 1.7e-09 66.2 136 39.7
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 5.0e-09 64.7 164 36.6
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 5.0e-09 64.7 163 35.0
Ah.08g210350 Amaranthus hybridus HOM05D003436 ORTHO05D003674 6.6e-09 64.3 144 36.8
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 6.6e-09 64.3 158 36.7
Aqoxy6G00181 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 8.6e-09 63.9 115 45.2
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 8.6e-09 63.9 149 38.9
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea HOM05D003436 ORTHO05D003674 8.6e-09 63.9 149 37.6
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 1.1e-08 63.5 173 33.5
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 1.5e-08 63.2 153 37.9
Cc06_g15980 Coffea canephora HOM05D003436 ORTHO05D003674 7.3e-08 60.8 152 37.5
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 1.2e-07 60.1 153 38.6
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 1.2e-07 60.1 154 36.4
FvH4_6g22410 Fragaria vesca HOM05D003436 ORTHO05D003674 3.6e-07 58.5 164 36.0
FAN14G5712 Fragaria x ananassa HOM05D003436 ORTHO05D003674 3.6e-07 58.5 164 35.4
AUR62012039 Chenopodium quinoa HOM05D003436 ORTHO05D003674 4.7e-07 58.2 81 40.7
Actinidia22033 Actinidia chinensis HOM05D003436 ORTHO05D003674 6.2e-07 57.8 121 39.7
DCAR_013554 Daucus carota HOM05D003436 ORTHO05D003674 5.2e-06 54.7 99 40.4
AUR62015378 Chenopodium quinoa HOM05D003436 ORTHO05D003674 6.8e-06 54.3 173 30.1


User provided reference genes

Program Settings