Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 1.9e-37 158.7 81 100.0
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 4.7e-36 154.1 81 97.5
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 9.8e-34 146.4 81 93.8
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.5e-29 132.5 81 81.5
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 7.3e-29 130.2 79 82.3
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 7.5e-26 120.2 80 77.5
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 2.4e-24 115.2 81 75.3
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 3.2e-24 114.8 78 78.2
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 4.1e-24 114.4 80 75.0
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 7.0e-24 113.6 82 75.6
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 9.2e-24 113.2 82 74.4
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 9.2e-24 113.2 79 78.5
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 2.0e-23 112.1 79 78.5
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 2.0e-23 112.1 79 78.5
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 2.7e-23 111.7 82 73.2
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 7.8e-23 110.2 80 73.8
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.0e-22 109.8 79 68.4
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 3.0e-22 108.2 80 73.8
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 6.6e-22 107.1 78 75.6
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 1.1e-21 106.3 82 73.2
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.9e-21 105.5 74 79.7
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 3.3e-21 104.8 79 70.9
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 4.3e-21 104.4 79 69.6
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 4.3e-21 104.4 79 69.6
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 5.6e-21 104.0 79 69.6
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 5.6e-21 104.0 79 72.2
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 5.6e-21 104.0 79 70.9
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 5.6e-21 104.0 79 70.9
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 5.6e-21 104.0 78 70.5
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 7.3e-21 103.6 79 70.9
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 9.5e-21 103.2 79 69.6
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 1.2e-20 102.8 79 70.9
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 1.6e-20 102.4 79 70.9
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 1.6e-20 102.4 79 70.9
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 1.6e-20 102.4 78 70.5
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 2.1e-20 102.1 79 69.6
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 2.1e-20 102.1 79 69.6
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 2.8e-20 101.7 81 69.1
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 3.6e-20 101.3 86 68.6
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 3.6e-20 101.3 81 67.9
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 3.6e-20 101.3 78 70.5
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 4.7e-20 100.9 78 70.5
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 6.2e-20 100.5 79 68.4
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 1.1e-19 99.8 79 68.4
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 1.4e-19 99.4 79 67.1
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 1.8e-19 99.0 79 67.1
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 1.8e-19 99.0 79 65.8
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 1.8e-19 99.0 79 65.8
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 2.3e-19 98.6 79 68.4
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 2.3e-19 98.6 79 68.4
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 2.3e-19 98.6 89 64.0
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 2.3e-19 98.6 79 68.4
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 3.1e-19 98.2 78 67.9
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 4.0e-19 97.8 78 69.2
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 4.0e-19 97.8 79 69.6
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 4.0e-19 97.8 79 65.8
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 5.2e-19 97.4 78 69.2
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 5.2e-19 97.4 79 68.4
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 1.2e-18 96.3 79 67.1
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 1.2e-18 96.3 79 65.8
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 1.2e-18 96.3 63 74.6
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 2.6e-18 95.1 79 65.8
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 3.4e-18 94.7 79 64.6
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 3.4e-18 94.7 79 64.6
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 3.4e-18 94.7 79 64.6
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 3.4e-18 94.7 75 65.3
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 4.4e-18 94.4 78 62.8
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 1.3e-17 92.8 78 59.0
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 2.2e-17 92.0 80 60.0
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.2e-17 92.0 80 68.8
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 3.7e-17 91.3 65 73.8
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 3.7e-17 91.3 78 65.4
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 1.1e-16 89.7 89 58.4
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 1.1e-16 89.7 80 60.0
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 2.4e-16 88.6 79 58.2
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 3.2e-16 88.2 88 56.8
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.1e-16 87.8 79 58.2
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 7.0e-16 87.0 88 58.0
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.0e-16 87.0 79 57.0
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.2e-16 86.7 79 57.0
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 9.2e-16 86.7 90 55.6
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.0e-15 85.5 79 55.7
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.0e-15 85.5 79 55.7
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 2.7e-15 85.1 79 57.0
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 4.6e-15 84.3 78 62.8
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.0e-15 84.0 79 55.7
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 6.0e-15 84.0 96 51.0
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.0e-14 83.2 79 54.4
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.0e-14 83.2 79 54.4
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 1.0e-14 83.2 77 63.6
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.7e-14 82.4 79 54.4
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 8.6e-14 80.1 64 67.2
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 4.3e-13 77.8 79 60.8
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.8e-12 75.1 82 57.3
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.8e-12 75.1 82 57.3
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 8.1e-12 73.6 71 53.5
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 2.2e-09 65.5 81 51.9
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 3.7e-09 64.7 82 52.4
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 1.6e-07 59.3 41 68.3
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 2.3e-06 55.5 80 50.0


User provided reference genes

Program Settings