Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g044746.1 Solanum lycopersicum HOM05D000030 ORTHO05D011827 8.8e-87 323.6 159 100.0
CAN.G359.4 Capsicum annuum HOM05D000030 ORTHO05D000009 1.3e-21 107.1 88 58.0
CAN.G244.2 Capsicum annuum HOM05D000030 ORTHO05D000009 2.9e-21 105.9 85 61.2
Peaxi162Scf00897g00411 Petunia axillaris HOM05D000030 ORTHO05D000009 1.1e-20 104.0 84 60.7
CSS0014370 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.4e-12 77.0 87 43.7
CSS0008365 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.2e-12 75.9 87 43.7
CSS0017014 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.2e-12 75.9 87 43.7
CSS0038163 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.2e-12 75.9 87 43.7
CSS0042125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.2e-12 75.9 87 43.7
CSS0043849 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.2e-12 75.9 87 43.7
Manes.17G045102 Manihot esculenta HOM05D000030 ORTHO05D000009 5.4e-12 75.1 98 42.9
CSS0002103 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-12 74.7 87 42.5
CSS0023651 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-12 74.7 87 42.5
CSS0029242 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-12 74.7 87 42.5
CSS0032552 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-12 74.7 87 42.5
CSS0034407 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-12 74.7 87 42.5
CSS0041907 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 7.1e-12 74.7 87 42.5
Manes.11G060433 Manihot esculenta HOM05D000030 ORTHO05D000009 9.3e-12 74.3 98 41.8
Manes.11G060450 Manihot esculenta HOM05D000030 ORTHO05D000009 9.3e-12 74.3 98 41.8
Manes.11G130116 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-11 73.6 98 41.8
CSS0029287 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.7e-11 72.8 87 41.4
CSS0001939 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.6e-11 72.0 96 39.6
CSS0038269 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.6e-11 72.0 96 39.6
CSS0039597 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.6e-11 72.0 96 39.6
Manes.03G052916 Manihot esculenta HOM05D000030 ORTHO05D000009 4.6e-11 72.0 98 41.8
CSS0036842 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.0e-11 71.6 87 41.4
CSS0016546 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.3e-10 69.7 90 38.9
Manes.05G008504 Manihot esculenta HOM05D000030 ORTHO05D000009 2.3e-10 69.7 98 39.8
Manes.16G030901 Manihot esculenta HOM05D000030 ORTHO05D000009 2.3e-10 69.7 98 39.8
CSS0037816 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.0e-10 69.3 90 37.8
Manes.03G114216 Manihot esculenta HOM05D000030 ORTHO05D000009 3.0e-10 69.3 98 40.8
Hma1.2p1_0007F.1_g005280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.9e-10 68.9 94 41.5
Manes.05G090550 Manihot esculenta HOM05D000030 ORTHO05D000009 5.1e-10 68.6 98 39.8
CSS0012167 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.6e-10 68.2 92 41.3
Hma1.2p1_0066F.1_g036660 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.7e-10 67.8 94 41.5
Hma1.2p1_0982F.1_g243880 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.7e-10 67.8 91 38.5
Rhsim07G0157200 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.7e-10 67.8 112 33.9
Ah.08g218550 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.9e-09 66.6 92 38.0
Atru.chr5.1563 Acer truncatum HOM05D000030 ORTHO05D000009 2.5e-09 66.2 92 37.0
AUR62027940 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.3e-09 65.9 94 39.4
AUR62044584 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.3e-09 65.9 94 39.4
Hma1.2p1_1030F.1_g249810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.3e-09 65.9 89 38.2
CSS0008004 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.3e-09 65.5 87 40.2
AUR62037889 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.6e-09 65.1 94 39.4
Hma1.2p1_1179F.1_g264470 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.3e-09 64.7 95 38.9
TWI15G0529 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 7.3e-09 64.7 90 35.6
FvH4_2g14281 Fragaria vesca HOM05D000030 ORTHO05D000031 9.6e-09 64.3 91 35.2
FvH4_6g37061 Fragaria vesca HOM05D000030 ORTHO05D000031 9.6e-09 64.3 91 35.2
Hma1.2p1_0195F.1_g084610 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.3e-08 63.9 94 39.4
Hma1.2p1_0769F.1_g215780 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.3e-08 63.9 94 39.4
Hma1.2p1_1415F.1_g281990 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.3e-08 63.9 94 38.3
Psat0s3213g0080 Pisum sativum HOM05D000030 ORTHO05D000009 1.3e-08 63.9 92 38.0
Rhsim03G0195100 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-08 63.2 97 37.1
Hma1.2p1_0390F.1_g142670 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.8e-08 62.8 94 38.3
Os10g0443400 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 2.8e-08 62.8 88 38.6
Rhsim03G0207300 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.8e-08 62.8 88 37.5
Rhsim08G0084900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.8e-08 62.8 88 37.5
Atru.chr3.2210 Acer truncatum HOM05D000030 ORTHO05D000009 3.6e-08 62.4 89 37.1
Atru.chr3.2216 Acer truncatum HOM05D000030 ORTHO05D000009 3.6e-08 62.4 89 37.1
AUR62023658 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-08 62.4 94 38.3
Hma1.2p1_0784F.1_g217220 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-08 62.4 94 38.3
Hma1.2p1_1923F.1_g307630 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.6e-08 62.4 94 38.3
PSO761G0699 Papaver somniferum HOM05D000030 ORTHO05D000009 3.6e-08 62.4 88 38.6
QL06p028065 Quercus lobata HOM05D000030 ORTHO05D000009 3.6e-08 62.4 98 39.8
Rhsim02G0160600 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-08 62.4 90 37.8
Rhsim08G0115000 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-08 62.4 90 37.8
AUR62014048 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.8e-08 62.0 94 37.2
Os02g0521366 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 4.8e-08 62.0 88 38.6
Os07g0525300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 4.8e-08 62.0 88 38.6
PSO135G0777 Papaver somniferum HOM05D000030 ORTHO05D000009 4.8e-08 62.0 88 38.6
PSO478G0147 Papaver somniferum HOM05D000030 ORTHO05D000009 4.8e-08 62.0 88 38.6
PSO541G2524 Papaver somniferum HOM05D000030 ORTHO05D000009 4.8e-08 62.0 88 38.6
Rhsim05G0179900 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.8e-08 62.0 97 37.1
Rhsim07G0112400 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.8e-08 62.0 91 37.4
AUR62027935 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.1e-08 61.2 94 38.3
Hma1.2p1_1073F.1_g254260 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.1e-08 61.2 77 45.5
Rhsim07G0112500 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.1e-08 61.2 91 37.4
AUR62010946 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.1e-07 60.8 98 35.7
FvH4_4g15661 Fragaria vesca HOM05D000030 ORTHO05D000009 1.1e-07 60.8 89 33.7
Manes.05G070350 Manihot esculenta HOM05D000030 ORTHO05D000009 1.1e-07 60.8 85 38.8
PSO067G0052 Papaver somniferum HOM05D000030 ORTHO05D000009 1.4e-07 60.5 96 35.4
Rhsim05G0120200 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-07 60.5 97 36.1
Rhsim05G0140000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-07 60.5 97 36.1
Rhsim11G0121600 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.4e-07 60.5 90 36.7
Atru.chr2.1547 Acer truncatum HOM05D000030 ORTHO05D000009 1.8e-07 60.1 89 37.1
AUR62037162 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.8e-07 60.1 94 38.3
Ciclev10024286m.g Citrus clementina HOM05D000030 ORTHO05D000009 1.8e-07 60.1 88 40.9
PSO541G2409 Papaver somniferum HOM05D000030 ORTHO05D000009 1.8e-07 60.1 131 29.8
Rhsim08G0166400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.8e-07 60.1 88 36.4
Ah.07g196470 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.4e-07 59.7 92 34.8
PSO478G1203 Papaver somniferum HOM05D000030 ORTHO05D000009 2.4e-07 59.7 88 37.5
Psat5g046920 Pisum sativum HOM05D000030 ORTHO05D000009 2.4e-07 59.7 94 36.2
PSO478G3458 Papaver somniferum HOM05D000030 ORTHO05D000009 3.1e-07 59.3 88 37.5
Psat1g098560 Pisum sativum HOM05D000030 ORTHO05D000009 3.1e-07 59.3 94 36.2
Psat2g049800 Pisum sativum HOM05D000030 ORTHO05D000009 3.1e-07 59.3 94 36.2
Psat7g076400 Pisum sativum HOM05D000030 ORTHO05D000009 3.1e-07 59.3 94 36.2
Oeu018261.1 Olea europaea HOM05D000030 ORTHO05D000009 4.0e-07 58.9 98 33.7
Os01g0698300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 4.0e-07 58.9 114 32.5
PSO675G2696 Papaver somniferum HOM05D000030 ORTHO05D000009 4.0e-07 58.9 131 29.0
Atru.chr13.2043 Acer truncatum HOM05D000030 ORTHO05D000009 5.3e-07 58.5 89 34.8
Dinv01288 Davidia involucrata HOM05D000030 ORTHO05D000009 5.3e-07 58.5 92 35.9
PSO675G2294 Papaver somniferum HOM05D000030 ORTHO05D000009 5.3e-07 58.5 88 37.5
Aqoxy1G01896 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 6.9e-07 58.2 132 28.0
CSS0049810 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 6.9e-07 58.2 32 78.1
AUR62006510 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.9e-07 58.2 91 33.0
Nitab4.5_0001599g0150 Nicotiana tabacum HOM05D011079 ORTHO05D011827 6.9e-07 58.2 41 65.9
SGA_v2.0_scaffold34G13773 Striga asiatica HOM05D000030 ORTHO05D000009 6.9e-07 58.2 86 34.9
Oeu056385.1 Olea europaea HOM05D000030 ORTHO05D000009 1.5e-06 57.0 98 31.6
QL02p003957 Quercus lobata HOM05D000030 ORTHO05D000009 1.5e-06 57.0 94 37.2
Rhsim09G0082900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-06 57.0 96 35.4
Hma1.2p1_0050F.1_g028760 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.0e-06 56.6 110 30.0
Hma1.2p1_1409F.1_g281640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.0e-06 56.6 78 43.6
Lalb_Chr01g0016351 Lupinus albus HOM05D000030 ORTHO05D000009 2.0e-06 56.6 144 29.9
Oeu000293.1 Olea europaea HOM05D000030 ORTHO05D000009 2.0e-06 56.6 100 34.0
Oeu057693.1 Olea europaea HOM05D000030 ORTHO05D000009 2.0e-06 56.6 100 34.0
Rhsim12G0109500 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-06 56.6 112 30.4
Atru.chr1.3476 Acer truncatum HOM05D000030 ORTHO05D000009 2.6e-06 56.2 85 35.3
AUR62026473 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.6e-06 56.2 91 30.8
AUR62037868 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.6e-06 56.2 91 30.8
Duzib235G1281 Durio zibethinus HOM05D000030 ORTHO05D000009 2.6e-06 56.2 98 36.7
Oeu036151.1 Olea europaea HOM05D000030 ORTHO05D000009 2.6e-06 56.2 100 34.0
AUR62000116 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62000910 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62002453 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62003157 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62004700 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62004826 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62005748 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62006788 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62007254 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62007273 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62010882 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62010947 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62011137 Chenopodium quinoa HOM05D000315 ORTHO05D001379 3.4e-06 55.8 91 30.8
AUR62014714 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62015463 Chenopodium quinoa HOM05D005356 ORTHO05D006596 3.4e-06 55.8 91 30.8
AUR62015825 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62015828 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62016856 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62020070 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62020607 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62021453 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62021667 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62021681 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62022310 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62022368 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62022415 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62022906 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62026195 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62026196 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62026212 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62027346 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62027830 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62030015 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62030537 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62033685 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 93 33.3
AUR62035290 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62036008 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62037004 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62037206 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62037277 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 30.8
AUR62038485 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 31.9
QL93p1872_0051 Quercus lobata HOM05D000030 ORTHO05D000009 3.4e-06 55.8 91 36.3
SGA_v2.0_scaffold8G04240 Striga asiatica HOM05D000030 ORTHO05D000009 3.4e-06 55.8 86 33.7
AUR62012913 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.5e-06 55.5 81 32.1
AUR62020746 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.5e-06 55.5 91 30.8
Oeu029023.1 Olea europaea HOM05D000030 ORTHO05D000009 4.5e-06 55.5 112 31.2
QL12p011615 Quercus lobata HOM05D000030 ORTHO05D000009 4.5e-06 55.5 91 36.3
AUR62017659 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.8e-06 55.1 91 30.8
AUR62030261 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.8e-06 55.1 91 30.8
Gohir.A08G234120 Gossypium hirsutum HOM05D000030 ORTHO05D000009 5.8e-06 55.1 123 30.1
Os03g0822100 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 5.8e-06 55.1 93 32.3
Atru.chr2.1941 Acer truncatum HOM05D000030 ORTHO05D000009 7.6e-06 54.7 143 28.0
Atru.chr2.1965 Acer truncatum HOM05D000030 ORTHO05D000009 7.6e-06 54.7 143 28.0
FvH4_3g33584 Fragaria vesca HOM05D000030 ORTHO05D000009 7.6e-06 54.7 83 32.5
Gorai.004G271300 Gossypium raimondii HOM05D000030 ORTHO05D000009 7.6e-06 54.7 123 30.1
Lalb_Chr25g0285641 Lupinus albus HOM05D000030 ORTHO05D000009 7.6e-06 54.7 146 28.1
EL10Ac9g22483 Beta vulgaris HOM05D000030 ORTHO05D000009 9.9e-06 54.3 94 31.9
AUR62007833 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.9e-06 54.3 81 32.1
AUR62009541 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.9e-06 54.3 91 30.8
AUR62012031 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.9e-06 54.3 81 32.1
PSO761G0633 Papaver somniferum HOM05D000030 ORTHO05D000009 9.9e-06 54.3 82 39.0
Psat6g152640 Pisum sativum HOM05D000030 ORTHO05D000009 9.9e-06 54.3 96 34.4


User provided reference genes

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