Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g044485.1 Solanum lycopersicum HOM05D000494 ORTHO05D391644 2.6e-40 168.3 86 100.0
Nitab4.5_0000486g0180 Nicotiana tabacum HOM05D000494 ORTHO05D000556 2.6e-08 62.0 39 76.9
Nitab4.5_0004356g0010 Nicotiana tabacum HOM05D000494 ORTHO05D000556 2.6e-08 62.0 39 76.9
CAN.G311.138 Capsicum annuum HOM05D000494 ORTHO05D000556 4.4e-08 61.2 37 81.1
Peaxi162Scf01114g00013 Petunia axillaris HOM05D000494 ORTHO05D000556 9.8e-08 60.1 37 78.4
PGSC0003DMG400009990 Solanum tuberosum HOM05D000494 ORTHO05D000556 9.8e-08 60.1 35 85.7
Solyc04g082600.3 Solanum lycopersicum HOM05D000494 ORTHO05D000556 1.3e-07 59.7 35 85.7
Sopen04g036230 Solanum pennellii HOM05D000494 ORTHO05D000556 1.3e-07 59.7 35 85.7
BcaB02g10583 Brassica carinata HOM05D000494 ORTHO05D000556 3.7e-07 58.2 39 74.4
BcaC02g07812 Brassica carinata HOM05D000494 ORTHO05D000556 8.3e-07 57.0 39 71.8
C04p63200 Brassica napus HOM05D000494 ORTHO05D000556 8.3e-07 57.0 39 71.8
Potri.002G007500 Populus trichocarpa HOM05D000494 ORTHO05D000556 8.3e-07 57.0 39 69.2
BcaB06g28713 Brassica carinata HOM05D000494 ORTHO05D000556 1.1e-06 56.6 39 71.8
Cc10_g00470 Coffea canephora HOM05D000494 ORTHO05D000556 1.1e-06 56.6 39 69.2
Sabra05G0196800 Salix brachista HOM05D000494 ORTHO05D000556 1.1e-06 56.6 37 73.0
Sp4g16040 Schrenkiella parvula HOM05D000494 ORTHO05D000556 1.1e-06 56.6 39 71.8
BcaC02g11444 Brassica carinata HOM05D000494 ORTHO05D000556 1.4e-06 56.2 39 71.8
C04p15480 Brassica napus HOM05D000494 ORTHO05D000556 1.4e-06 56.2 39 71.8
BolC4t23119H Brassica oleracea HOM05D000494 ORTHO05D000556 1.4e-06 56.2 39 71.8
Dinv31969 Davidia involucrata HOM05D000494 ORTHO05D000556 1.4e-06 56.2 39 71.8
Dinv41870 Davidia involucrata HOM05D000089 ORTHO05D000556 1.4e-06 56.2 51 58.8
vmacro04417 Vaccinium macrocarpon HOM05D000494 ORTHO05D000556 1.4e-06 56.2 39 69.2
A05p11920 Brassica napus HOM05D000494 ORTHO05D000556 1.8e-06 55.8 39 71.8
BraA05t20136Z Brassica rapa HOM05D000494 ORTHO05D000556 1.8e-06 55.8 39 71.8
DCAR_016787 Daucus carota HOM05D000494 ORTHO05D000556 1.8e-06 55.8 39 64.1
DCAR_016788 Daucus carota HOM05D000494 ORTHO05D000556 1.8e-06 55.8 39 64.1
Manes.18G003500 Manihot esculenta HOM05D000494 ORTHO05D000556 1.8e-06 55.8 37 70.3
Oeu016876.1 Olea europaea HOM05D000494 ORTHO05D000556 1.8e-06 55.8 35 77.1
BraA04t18095Z Brassica rapa HOM05D000494 ORTHO05D000556 2.4e-06 55.5 39 69.2
Sabra02G0005800 Salix brachista HOM05D000494 ORTHO05D000556 2.4e-06 55.5 39 66.7
TWI36G1365 Tripterygium wilfordii HOM05D000494 ORTHO05D000556 2.4e-06 55.5 39 71.8
COL.COLO4_37753 Corchorus olitorius HOM05D000494 ORTHO05D000556 3.1e-06 55.1 39 71.8
Gohir.A01G103300 Gossypium hirsutum HOM05D000494 ORTHO05D000556 3.1e-06 55.1 39 71.8
Gohir.D01G088600 Gossypium hirsutum HOM05D000494 ORTHO05D000556 3.1e-06 55.1 39 71.8
Gorai.002G114300 Gossypium raimondii HOM05D000494 ORTHO05D000556 3.1e-06 55.1 39 71.8
Oeu019562.1 Olea europaea HOM05D000494 ORTHO05D000556 3.1e-06 55.1 35 74.3
AL4G29370 Arabidopsis lyrata HOM05D000494 ORTHO05D000556 4.1e-06 54.7 39 69.2
AT2G33700 Arabidopsis thaliana HOM05D000494 ORTHO05D000556 4.1e-06 54.7 39 69.2
BolC4t27793H Brassica oleracea HOM05D000494 ORTHO05D000556 4.1e-06 54.7 39 69.2
Carub.0004s1531 Capsella rubella HOM05D000494 ORTHO05D000556 4.1e-06 54.7 39 69.2
CARHR127700 Cardamine hirsuta HOM05D000494 ORTHO05D000556 4.1e-06 54.7 39 69.2
AUR62035145 Chenopodium quinoa HOM05D000494 ORTHO05D000556 4.1e-06 54.7 48 62.5
AUR62042584 Chenopodium quinoa HOM05D000494 ORTHO05D000556 4.1e-06 54.7 48 62.5
Rhsim07G0256900 Rhododendron simsii HOM05D000494 ORTHO05D000556 4.1e-06 54.7 39 66.7
A04p25920 Brassica napus HOM05D000494 ORTHO05D000556 5.4e-06 54.3 39 69.2
CSS0027571 Camellia sinensis var. sinensis HOM05D000494 ORTHO05D000556 5.4e-06 54.3 39 66.7
HanXRQChr05g0144811 Helianthus annuus HOM05D000494 ORTHO05D000556 5.4e-06 54.3 39 61.5
Manes.13G068901 Manihot esculenta HOM05D000494 ORTHO05D000556 5.4e-06 54.3 39 69.2
Potri.005G253700 Populus trichocarpa HOM05D000494 ORTHO05D000556 5.4e-06 54.3 37 70.3
EL10Ac1g01909 Beta vulgaris HOM05D000494 ORTHO05D000556 7.0e-06 53.9 39 66.7
Atru.chr13.100 Acer truncatum HOM05D000494 ORTHO05D000556 9.2e-06 53.5 49 57.1
Ciclev10001476m.g Citrus clementina HOM05D000494 ORTHO05D000556 9.2e-06 53.5 39 66.7
Lj4A809T56 Lonicera japonica HOM05D000494 ORTHO05D000556 9.2e-06 53.5 50 56.0
Thecc.08G062800 Theobroma cacao HOM05D000494 ORTHO05D000556 9.2e-06 53.5 39 71.8


User provided reference genes

Program Settings