Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 6.7e-68 260.8 153 100.0
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 6.5e-63 244.2 153 85.0
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-62 242.7 153 94.8
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-62 242.7 153 94.8
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-62 242.3 153 94.8
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-62 242.3 153 94.8
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 2.5e-62 242.3 153 94.8
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-62 242.3 153 94.8
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-62 242.3 153 94.8
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-62 242.3 153 94.8
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-62 242.3 153 94.8
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-61 239.6 153 91.5
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 1.6e-61 239.6 153 91.5
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-61 239.6 153 91.5
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-61 239.2 153 91.5
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-61 239.2 153 91.5
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-61 239.2 153 91.5
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-61 239.2 153 91.5
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-61 239.2 153 92.8
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-61 239.2 153 91.5
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-60 236.5 153 90.8
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 6.7e-60 234.2 153 92.2
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 3.3e-59 231.9 153 89.5
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 9.7e-59 230.3 150 80.7
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-53 212.2 141 89.4
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.0e-52 208.4 129 88.4
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 2.0e-51 206.1 131 92.4
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 1.7e-50 203.0 115 89.6
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-49 200.3 149 81.2
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 1.8e-49 199.5 131 90.8
Solyc06g007395.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.2e-48 196.8 106 98.1
PGSC0003DMG400029070 Solanum tuberosum HOM05D006921 ORTHO05D009185 5.4e-41 171.4 137 81.0
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-39 164.1 105 85.7
Sopen12g025000 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-35 152.9 153 69.3
Solyc04g049897.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 3.4e-35 152.1 103 84.5
Solyc11g017105.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 2.8e-29 132.5 86 75.6
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 2.8e-29 132.5 81 86.4
Sopen05g015150 Solanum pennellii HOM05D000017 ORTHO05D000013 6.8e-28 127.9 74 87.8
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 4.6e-24 115.2 79 78.5
Sopen08g012180 Solanum pennellii HOM05D000002 ORTHO05D009185 6.0e-24 114.8 153 56.9
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 3.9e-23 112.1 136 50.0
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.3e-22 109.0 147 46.3
Sopen01g015990 Solanum pennellii HOM05D000017 ORTHO05D009185 4.7e-21 105.1 66 81.8
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 1.8e-20 103.2 142 48.6
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 1.2e-19 100.5 121 44.6
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.5e-19 100.1 109 53.2
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.6e-19 99.4 149 47.0
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.4e-19 98.6 107 53.3
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-18 96.7 107 51.4
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-18 95.9 101 51.5
PGSC0003DMG400029950 Solanum tuberosum HOM05D000017 ORTHO05D009185 1.1e-17 94.0 104 57.7
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.4e-17 93.6 128 47.7
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 5.4e-17 91.7 92 50.0
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.2e-17 90.9 75 58.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 6.0e-16 88.2 87 50.6
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.0e-15 87.4 137 46.7
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-15 87.0 88 51.1
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 3.0e-15 85.9 89 50.6
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.6e-15 84.7 170 39.4
Nitab4.5_0000104g0090 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.3e-14 81.3 120 44.2
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 7.3e-14 81.3 100 46.0
Solyc09g042673.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 7.3e-14 81.3 108 50.0
Nitab4.5_0007178g0020 Nicotiana tabacum HOM05D006921 ORTHO05D001349 1.6e-13 80.1 112 49.1
Nitab4.5_0000804g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.7e-13 78.6 126 44.4
Nitab4.5_0002403g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.4e-12 77.0 79 51.9
Nitab4.5_0000263g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.8e-12 76.6 78 52.6
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 1.8e-12 76.6 84 47.6
Nitab4.5_0005003g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.1e-12 75.9 81 49.4
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 8.9e-12 74.3 80 47.5
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.9e-12 74.3 90 46.7
Nitab4.5_0001068g0130 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.5e-11 73.6 56 60.7
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.5e-11 73.6 95 45.3
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.5e-11 73.6 70 52.9
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.5e-11 73.6 81 51.9
Nitab4.5_0002244g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.0e-11 73.2 106 41.5
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.0e-11 73.2 90 46.7
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.6e-11 72.8 89 49.4
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.4e-11 72.4 70 54.3
Peaxi162Scf00294g00624 Petunia axillaris HOM05D006921 ORTHO05D009185 4.4e-11 72.0 132 41.7
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.8e-11 71.6 95 44.2
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 5.8e-11 71.6 145 36.6
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 9.9e-11 70.9 95 44.2
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.9e-11 70.9 64 53.1
Peaxi162Scf00579g00618 Petunia axillaris HOM05D006921 ORTHO05D009185 1.3e-10 70.5 108 38.0
Nitab4.5_0008198g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.7e-10 70.1 82 46.3
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 1.7e-10 70.1 110 37.3
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-10 70.1 147 34.7
Nitab4.5_0002898g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.2e-10 69.7 126 39.7
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 2.2e-10 69.7 81 49.4
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 2.2e-10 69.7 139 33.1
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 2.9e-10 69.3 81 49.4
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 3.8e-10 68.9 81 49.4
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 3.8e-10 68.9 81 49.4
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 3.8e-10 68.9 81 49.4
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-10 68.9 147 34.7
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-10 68.9 147 34.7
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 3.8e-10 68.9 81 49.4
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-10 68.9 147 34.7
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-10 68.9 147 34.7
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-10 68.9 147 34.7
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 4.9e-10 68.6 69 49.3
Peaxi162Scf00691g00312 Petunia axillaris HOM05D006921 ORTHO05D009185 4.9e-10 68.6 82 45.1
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-10 68.2 147 36.1
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 8.4e-10 67.8 70 48.6
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 8.4e-10 67.8 81 48.1
Nitab4.5_0000309g0360 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-09 67.4 49 63.3
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-09 67.4 69 44.9
Nitab4.5_0002271g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.9e-09 66.6 136 34.6
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-09 66.6 96 42.7
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-09 66.6 115 38.3
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-09 66.6 102 38.2
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-09 66.6 81 48.1
Nitab4.5_0000519g0420 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.4e-09 66.2 46 67.4
Nitab4.5_0003688g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.4e-09 66.2 53 58.5
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 2.4e-09 66.2 69 49.3
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.4e-09 66.2 69 49.3
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 3.2e-09 65.9 81 48.1
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 5.4e-09 65.1 69 43.5
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-09 65.1 69 44.9
Nitab4.5_0000025g0440 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.1e-09 64.7 76 48.7
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 7.1e-09 64.7 62 54.8
Peaxi162Scf00704g00002 Petunia axillaris HOM05D006921 ORTHO05D009185 7.1e-09 64.7 54 55.6
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 9.2e-09 64.3 69 47.8
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 9.2e-09 64.3 81 46.9
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 9.2e-09 64.3 114 36.8
Nitab4.5_0000268g0070 Nicotiana tabacum HOM05D006921 ORTHO05D023010 1.2e-08 63.9 67 52.2
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-08 63.9 100 43.0
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.2e-08 63.9 122 39.3
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-08 63.5 81 46.9
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.6e-08 63.5 69 43.5
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 2.7e-08 62.8 81 46.9
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.6e-08 62.0 72 47.2
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 4.6e-08 62.0 114 36.8
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.6e-08 62.0 110 39.1
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 6.0e-08 61.6 72 45.8
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 6.0e-08 61.6 79 44.3
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 7.8e-08 61.2 100 36.0
Nitab4.5_0006440g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.8e-08 61.2 58 55.2
Nitab4.5_0000825g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.0e-07 60.8 66 50.0
Nitab4.5_0001547g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.0e-07 60.8 76 47.4
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 1.3e-07 60.5 79 43.0
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.3e-07 60.5 100 40.0
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 3.0e-07 59.3 81 45.7
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 3.0e-07 59.3 142 33.1
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.0e-07 59.3 100 40.0
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 8.6e-07 57.8 101 33.7
Peaxi162Scf00258g00412 Petunia axillaris HOM05D006921 ORTHO05D009185 8.6e-07 57.8 41 56.1
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 1.1e-06 57.4 100 34.0
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 1.1e-06 57.4 71 45.1
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-06 57.4 115 35.7
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.5e-06 57.0 86 43.0
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.5e-06 57.0 73 42.5
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.9e-06 56.6 72 43.1
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-06 56.6 77 45.5
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.9e-06 56.6 92 37.0
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-06 56.2 100 40.0
Peaxi162Scf00282g00135 Petunia axillaris HOM05D006921 ORTHO05D009185 2.5e-06 56.2 67 38.8
Solyc08g061275.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 2.5e-06 56.2 68 48.5
Peaxi162Scf00158g00811 Petunia axillaris HOM05D000017 ORTHO05D001349 4.3e-06 55.5 96 43.8
Peaxi162Scf00176g00082 Petunia axillaris HOM05D000800 ORTHO05D000658 4.3e-06 55.5 59 47.5
Peaxi162Scf00241g00324 Petunia axillaris HOM05D000017 ORTHO05D012383 4.3e-06 55.5 96 43.8
Peaxi162Scf00261g01113 Petunia axillaris HOM05D000017 ORTHO05D001349 4.3e-06 55.5 96 43.8
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.6e-06 55.1 83 42.2
Nitab4.5_0009937g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 5.6e-06 55.1 68 52.9
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 5.6e-06 55.1 72 47.2
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 5.6e-06 55.1 147 31.3
Sopen10g028660 Solanum pennellii HOM05D004064 ORTHO05D009561 5.6e-06 55.1 91 38.5
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 7.3e-06 54.7 80 41.2
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 9.6e-06 54.3 69 37.7
Peaxi162Scf00131g00813 Petunia axillaris HOM05D000017 ORTHO05D001349 9.6e-06 54.3 118 35.6
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 9.6e-06 54.3 62 46.8
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 9.6e-06 54.3 135 34.1
PGSC0003DMG400017333 Solanum tuberosum HOM05D010431 ORTHO05D016891 9.6e-06 54.3 91 38.5


User provided reference genes

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