Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g044235.1 Solanum lycopersicum HOM05D000069 ORTHO05D016677 2.7e-28 127.9 60 100.0
PGSC0003DMG400020920 Solanum tuberosum HOM05D000069 ORTHO05D000060 1.1e-13 79.3 50 70.0
CAN.G11.5 Capsicum annuum HOM05D000069 ORTHO05D016677 4.1e-13 77.4 50 66.0
Sopen03g008300 Solanum pennellii HOM05D000069 ORTHO05D000060 1.2e-12 75.9 50 70.0
Solyc03g044230.1 Solanum lycopersicum HOM05D000069 ORTHO05D000060 1.0e-11 72.8 50 64.0
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 1.0e-11 72.8 50 64.0
TWI53G0137 Tripterygium wilfordii HOM05D000069 ORTHO05D000060 2.1e-09 65.1 50 56.0
TWI73G1090 Tripterygium wilfordii HOM05D000069 ORTHO05D000060 3.6e-09 64.3 50 54.0
COL.COLO4_11470 Corchorus olitorius HOM05D000069 ORTHO05D000060 6.2e-09 63.5 50 52.0
Glyma.16G095900 Glycine max HOM05D000069 ORTHO05D000060 8.1e-09 63.2 50 50.0
Glyma.17G168300 Glycine max HOM05D000069 ORTHO05D000060 8.1e-09 63.2 50 50.0
Glyma.05G096800 Glycine max HOM05D000069 ORTHO05D000060 1.1e-08 62.8 50 52.0
Ciclev10025887m.g Citrus clementina HOM05D000069 ORTHO05D000060 1.4e-08 62.4 50 54.0
Potri.005G141600 Populus trichocarpa HOM05D000069 ORTHO05D000060 1.4e-08 62.4 50 54.0
Manes.12G107700 Manihot esculenta HOM05D000069 ORTHO05D000060 2.3e-08 61.6 50 54.0
Potri.007G047600 Populus trichocarpa HOM05D000069 ORTHO05D000060 3.1e-08 61.2 50 54.0
PGSC0003DMG400024987 Solanum tuberosum HOM05D000069 ORTHO05D000060 3.1e-08 61.2 50 52.0
Manes.13G119500 Manihot esculenta HOM05D000069 ORTHO05D000060 4.0e-08 60.8 50 52.0
QL06p040189 Quercus lobata HOM05D000069 ORTHO05D000060 4.0e-08 60.8 49 51.0
Solyc02g093040.4 Solanum lycopersicum HOM05D000069 ORTHO05D000060 4.0e-08 60.8 50 54.0
CiPaw.02G006500 Carya illinoinensis HOM05D000069 ORTHO05D000060 6.8e-08 60.1 50 48.0
Eucgr.H02220 Eucalyptus grandis HOM05D000069 ORTHO05D000060 6.8e-08 60.1 50 46.0
SalBow5G1475 Salvia bowleyana HOM05D000069 ORTHO05D000060 6.8e-08 60.1 50 50.0
Prupe.6G230400 Prunus persica HOM05D000069 ORTHO05D000060 8.9e-08 59.7 49 49.0
Sopen02g037610 Solanum pennellii HOM05D000069 ORTHO05D000060 8.9e-08 59.7 50 52.0
Lj4A155T93 Lonicera japonica HOM05D000069 ORTHO05D000060 1.2e-07 59.3 50 44.0
Nitab4.5_0001039g0010 Nicotiana tabacum HOM05D000069 ORTHO05D000060 1.2e-07 59.3 50 52.0
Nitab4.5_0007370g0040 Nicotiana tabacum HOM05D016048 ORTHO05D022962 1.2e-07 59.3 47 55.3
Sabra05G0113100 Salix brachista HOM05D000069 ORTHO05D000060 1.2e-07 59.3 50 50.0
Actinidia36468 Actinidia chinensis HOM05D000069 ORTHO05D000060 1.5e-07 58.9 50 52.0
Psat0s3539g0040 Pisum sativum HOM05D000069 ORTHO05D000060 1.5e-07 58.9 50 46.0
Ca_22128_v3 Cicer arietinum L. HOM05D000069 ORTHO05D000060 2.0e-07 58.5 50 46.0
Dinv26855 Davidia involucrata HOM05D000069 ORTHO05D000060 2.0e-07 58.5 50 48.0
Duzib147G0191 Durio zibethinus HOM05D000069 ORTHO05D000060 2.0e-07 58.5 49 49.0
MD02G1177700 Malus domestica HOM05D000069 ORTHO05D000060 2.6e-07 58.2 49 49.0
Cpa.g.sc55.102 Carica papaya HOM05D000069 ORTHO05D000060 3.4e-07 57.8 49 49.0
CiPaw.01G014000 Carya illinoinensis HOM05D000069 ORTHO05D000060 3.4e-07 57.8 50 46.0
Dinv30024 Davidia involucrata HOM05D000069 ORTHO05D000060 3.4e-07 57.8 50 48.0
Dinv30026 Davidia involucrata HOM05D000069 ORTHO05D000060 3.4e-07 57.8 50 48.0
Gorai.007G216900 Gossypium raimondii HOM05D000069 ORTHO05D000060 3.4e-07 57.8 50 50.0
CAN.G370.26 Capsicum annuum HOM05D000069 ORTHO05D000060 5.8e-07 57.0 50 48.0
Gohir.A11G196400 Gossypium hirsutum HOM05D000069 ORTHO05D000060 5.8e-07 57.0 50 50.0
Thecc.01G062200 Theobroma cacao HOM05D000069 ORTHO05D000060 5.8e-07 57.0 49 49.0
Lj4g0026833 Lotus japonicus HOM05D000069 ORTHO05D000060 7.6e-07 56.6 53 47.2
Peaxi162Scf00549g00311 Petunia axillaris HOM05D000069 ORTHO05D000060 7.6e-07 56.6 50 48.0
Gohir.D11G202300 Gossypium hirsutum HOM05D000069 ORTHO05D000060 9.9e-07 56.2 50 50.0
VMungo0251G1164 Vigna mungo HOM05D000069 ORTHO05D000060 9.9e-07 56.2 50 40.0
MD15G1287500 Malus domestica HOM05D000069 ORTHO05D000060 1.3e-06 55.8 49 46.9
Migut.L00179 Erythranthe guttata HOM05D000069 ORTHO05D000060 1.7e-06 55.5 49 46.9
Lalb_Chr05g0226281 Lupinus albus HOM05D000069 ORTHO05D000060 1.7e-06 55.5 50 42.0
Prupe.8G131600 Prunus persica HOM05D000069 ORTHO05D000060 2.2e-06 55.1 50 50.0
PGR102G1561 Punica granatum HOM05D000069 ORTHO05D000060 2.2e-06 55.1 50 44.0
TAR376G1245 Trochodendron aralioides HOM05D000069 ORTHO05D000060 2.2e-06 55.1 50 52.0
TAR625G0982 Trochodendron aralioides HOM05D000069 ORTHO05D000060 2.2e-06 55.1 50 50.0
Phvul.003G240800 Phaseolus vulgaris HOM05D000069 ORTHO05D000060 2.9e-06 54.7 50 40.0
AUR62010266 Chenopodium quinoa HOM05D000069 ORTHO05D000060 4.9e-06 53.9 49 46.9
Rhsim10G0113200 Rhododendron simsii HOM05D000069 ORTHO05D000060 4.9e-06 53.9 50 42.0
Rhsim10G0113300 Rhododendron simsii HOM05D000069 ORTHO05D000060 4.9e-06 53.9 50 42.0
TAR381G1252 Trochodendron aralioides HOM05D000069 ORTHO05D000060 6.4e-06 53.5 50 50.0
CSS0031347 Camellia sinensis var. sinensis HOM05D000069 ORTHO05D000060 8.4e-06 53.1 50 48.0
Cfa004050 Carpinus fangiana HOM05D000069 ORTHO05D000060 8.4e-06 53.1 50 44.0
AUR62013247 Chenopodium quinoa HOM05D000069 ORTHO05D000060 8.4e-06 53.1 49 44.9
Haze_15360 Corylus avellana HOM05D000069 ORTHO05D000060 8.4e-06 53.1 50 44.0
Duzib264G0625 Durio zibethinus HOM05D000069 ORTHO05D000060 8.4e-06 53.1 49 46.9
Hma1.2p1_2648F.1_g326100 Hydrangea macrophylla HOM05D000069 ORTHO05D000060 8.4e-06 53.1 50 44.0


User provided reference genes

Program Settings