Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 8.8e-205 717.2 513 100.0
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 4.7e-150 535.4 465 90.8
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 2.7e-145 519.6 402 88.6
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.8e-126 456.4 407 83.3
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 2.6e-124 449.9 429 80.2
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 5.3e-101 372.5 438 69.4
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.3e-99 367.9 405 67.2
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 6.5e-99 365.5 470 72.8
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.5e-99 365.5 388 71.6
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 6.5e-99 365.5 403 69.5
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-98 364.8 398 69.8
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-98 364.4 409 67.5
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.2e-97 361.3 408 69.1
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 3.6e-97 359.8 407 66.6
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 6.1e-97 359.0 405 72.8
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 7.9e-97 358.6 405 72.6
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.4e-96 357.8 392 73.0
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 6.7e-96 355.5 396 72.2
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.0e-95 354.0 428 65.0
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 3.3e-95 353.2 398 71.9
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 9.7e-95 351.7 405 68.9
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.8e-94 350.1 363 74.9
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 6.3e-94 349.0 399 69.4
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 8.2e-94 348.6 409 66.5
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 8.2e-94 348.6 430 70.7
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.5e-92 342.8 405 71.1
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 4.5e-92 342.8 412 67.2
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 7.7e-92 342.0 404 71.8
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.0e-91 341.7 403 61.8
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 1.7e-91 340.9 410 67.6
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.2e-91 340.5 403 72.5
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 8.5e-91 338.6 399 57.4
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.1e-90 338.2 419 67.8
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 2.5e-90 337.0 391 66.0
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 2.5e-90 337.0 397 72.8
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 4.2e-90 336.3 394 69.0
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 7.2e-90 335.5 404 57.4
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.2e-89 334.7 368 73.4
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 2.1e-89 334.0 407 72.7
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 6.1e-89 332.4 411 72.7
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 6.1e-89 332.4 438 56.4
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 2.3e-88 330.5 398 62.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 4.0e-88 329.7 403 64.8
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 8.8e-88 328.6 408 66.2
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 1.1e-87 328.2 390 67.9
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.5e-87 327.8 243 74.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.5e-87 327.8 243 74.9
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 5.7e-87 325.9 407 67.8
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 7.5e-87 325.5 349 65.6
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.7e-86 324.3 390 66.7
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 8.2e-86 322.0 247 73.3
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-85 321.2 261 68.2
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.2e-84 318.2 409 67.7
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.6e-84 317.8 410 66.8
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 1.3e-83 314.7 402 62.9
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.7e-83 314.3 249 72.7
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 3.8e-83 313.2 402 65.2
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 1.1e-82 311.6 405 70.1
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.5e-82 311.2 436 57.6
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.5e-82 311.2 403 63.0
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.5e-82 311.2 249 72.7
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.5e-82 310.5 398 53.0
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 4.2e-82 309.7 404 66.6
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-81 308.1 397 65.7
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.6e-81 307.8 406 65.8
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.1e-81 307.4 406 65.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.7e-81 307.0 209 78.9
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.7e-81 306.2 414 55.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 6.1e-81 305.8 357 69.5
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.4e-80 304.7 368 71.5
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.8e-80 304.3 251 71.3
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 8.8e-80 302.0 415 62.2
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 8.8e-80 302.0 400 65.5
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.0e-79 300.8 413 64.4
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 3.4e-79 300.1 391 61.4
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 9.8e-79 298.5 406 62.1
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.1e-77 295.0 407 68.1
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.8e-77 294.3 388 63.9
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 7.0e-77 292.4 414 60.9
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 7.0e-77 292.4 402 64.2
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 3.2e-74 283.5 411 63.0
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.2e-73 281.6 426 57.7
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 5.2e-72 276.2 425 60.5
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 3.4e-71 273.5 216 73.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.0e-68 264.2 165 77.6
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 3.5e-68 263.5 166 77.7
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 3.8e-67 260.0 230 61.7
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 2.1e-65 254.2 263 62.7
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 6.8e-64 249.2 221 66.5
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 4.4e-63 246.5 160 74.4
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 1.3e-62 245.0 220 65.9
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.4e-61 241.5 147 79.6
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 2.4e-61 240.7 167 71.9
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 4.1e-61 240.0 214 63.6
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.2e-60 238.4 165 72.1
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.2e-60 238.4 165 72.1
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.2e-60 238.4 165 72.1
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 5.9e-60 236.1 165 71.5
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.9e-58 231.1 215 59.5
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.1e-56 223.8 165 67.3
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 5.8e-55 219.5 253 51.4
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.9e-54 217.2 164 64.6
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 9.5e-50 202.2 179 58.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.1e-49 201.1 163 62.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.2e-49 199.5 364 59.6
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.3e-48 197.6 219 57.1
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.3e-48 197.6 219 57.1
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 7.1e-37 159.5 152 56.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 8.1e-33 146.0 225 46.2
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 1.4e-29 135.2 170 46.5
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.3e-27 128.6 186 47.8
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 3.8e-22 110.5 183 39.3
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 8.7e-19 99.4 63 77.8
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.3e-17 95.5 157 73.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 6.9e-16 89.7 141 36.9
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.2e-12 79.0 117 41.9
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.3e-11 74.7 277 53.8
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 1.3e-09 68.9 95 44.2
HPP92_023605 Vanilla planifolia HOM05D006571 ORTHO05D007771 2.4e-08 64.7 113 53.1
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.0e-06 59.3 89 43.8
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 1.3e-06 58.9 84 40.5
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.7e-06 58.5 115 34.8


User provided reference genes

Program Settings