Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 1.6e-144 516.2 270 100.0
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 2.9e-114 415.6 225 98.2
PGSC0003DMG400045291 Solanum tuberosum HOM05D033312 ORTHO05D006370 3.5e-51 206.1 149 83.9
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 1.7e-34 150.6 274 33.2
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.7e-34 150.6 274 33.2
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.7e-34 150.6 274 33.2
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.2e-32 142.1 170 42.4
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 1.4e-31 141.0 138 45.7
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-31 141.0 138 45.7
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 1.2e-30 137.9 122 47.5
Sopen12g012330 Solanum pennellii HOM05D008032 ORTHO05D006370 1.5e-30 137.5 136 45.6
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-18 97.8 97 38.1
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-17 94.7 143 34.3
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.3e-17 92.0 137 32.1
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 4.7e-16 89.4 111 36.0
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 5.2e-15 85.9 113 33.6
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.8e-15 85.5 101 36.6
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.8e-15 85.5 127 29.9
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 6.8e-15 85.5 92 37.0
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.8e-15 85.5 101 40.6
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.8e-15 85.5 101 40.6
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.5e-14 84.3 107 35.5
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.4e-14 82.8 104 35.6
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.6e-14 82.0 129 32.6
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-13 80.1 97 36.1
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.7e-13 79.7 90 33.3
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 4.1e-12 76.3 109 29.4
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 4.1e-12 76.3 99 35.4
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 5.4e-12 75.9 90 34.4
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 9.2e-12 75.1 109 32.1
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.2e-12 75.1 75 40.0
PGSC0003DMG400044383 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-11 74.7 90 31.1
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 2.1e-11 73.9 150 28.0
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 3.5e-11 73.2 123 27.6
Rhsim10G0065700 Rhododendron simsii HOM05D008877 ORTHO05D006370 6.0e-11 72.4 81 35.8
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 7.8e-11 72.0 97 33.0
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.0e-10 71.6 105 30.5
Solyc01g060160.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 1.7e-10 70.9 112 28.6
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.7e-10 70.9 87 34.5
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 2.3e-10 70.5 97 30.9
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 2.3e-10 70.5 97 30.9
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 3.0e-10 70.1 97 27.8
Peaxi162Scf01129g00001 Petunia axillaris HOM05D008032 ORTHO05D006370 3.0e-10 70.1 120 34.2
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 5.1e-10 69.3 76 35.5
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 2.5e-09 67.0 92 32.6
PGSC0003DMG401029166 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.3e-09 65.5 92 29.3
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 2.8e-08 63.5 93 32.3
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 2.8e-08 63.5 66 33.3
PGSC0003DMG400014412 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.8e-08 63.5 64 42.2
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.7e-08 62.8 57 38.6
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 8.1e-08 62.0 113 31.0
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.1e-07 60.1 79 40.5
PGSC0003DMG400023316 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.1e-07 60.1 97 28.9
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.0e-07 59.7 75 32.0
Dinv07635 Davidia involucrata HOM05D003048 ORTHO05D003418 5.2e-07 59.3 98 32.7
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.8e-07 58.9 104 36.5
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 6.8e-07 58.9 97 25.8
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.9e-07 58.5 104 36.5
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.0e-06 57.4 114 30.7
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.0e-06 57.4 50 52.0
Nn5g28355 Nelumbo nucifera HOM05D023818 ORTHO05D022948 2.6e-06 57.0 74 35.1
PGSC0003DMG400027492 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.6e-06 57.0 57 31.6
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.4e-06 56.6 86 34.9
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.4e-06 56.6 55 41.8
Medtr1g024800 Medicago truncatula HOM05D002777 ORTHO05D001516 4.4e-06 56.2 80 38.8
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 5.8e-06 55.8 79 34.2
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 5.8e-06 55.8 66 36.4
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.6e-06 55.5 188 29.3
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 7.6e-06 55.5 99 28.3


User provided reference genes

Program Settings