Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 6.5e-41 170.2 83 100.0
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 2.5e-37 158.3 83 94.0
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 2.1e-31 138.7 82 81.7
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 1.0e-30 136.3 85 81.2
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 8.8e-30 133.3 83 80.7
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 4.8e-28 127.5 73 86.3
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 5.9e-26 120.6 81 71.6
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 6.1e-23 110.5 83 66.3
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 8.0e-23 110.2 82 69.5
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 6.7e-22 107.1 78 66.7
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 8.8e-22 106.7 74 71.6
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 1.1e-21 106.3 72 73.6
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 5.7e-21 104.0 77 71.4
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 9.7e-21 103.2 73 71.2
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 1.7e-20 102.4 72 75.0
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 2.2e-20 102.1 82 63.4
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 2.8e-20 101.7 72 68.1
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 8.2e-20 100.1 62 75.8
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 8.2e-20 100.1 71 66.2
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 1.1e-19 99.8 74 67.6
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 3.1e-19 98.2 75 68.0
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 4.1e-19 97.8 81 63.0
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 4.1e-19 97.8 76 64.5
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 5.3e-19 97.4 49 95.9
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 5.3e-19 97.4 76 63.2
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 7.0e-19 97.1 67 70.1
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 7.0e-19 97.1 74 62.2
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 7.0e-19 97.1 72 68.1
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 9.1e-19 96.7 75 66.7
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 9.1e-19 96.7 75 66.7
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 1.2e-18 96.3 71 67.6
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 1.6e-18 95.9 75 66.7
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 1.6e-18 95.9 75 66.7
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 1.6e-18 95.9 72 65.3
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 1.6e-18 95.9 72 66.7
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 1.6e-18 95.9 72 66.7
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 2.0e-18 95.5 71 66.2
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 2.0e-18 95.5 74 63.5
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 2.0e-18 95.5 72 66.7
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 2.0e-18 95.5 85 60.0
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 2.7e-18 95.1 57 77.2
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 3.5e-18 94.7 74 64.9
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 3.5e-18 94.7 71 66.2
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 3.5e-18 94.7 75 65.3
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 4.5e-18 94.4 71 64.8
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 4.5e-18 94.4 72 65.3
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 4.5e-18 94.4 69 66.7
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 4.5e-18 94.4 82 59.8
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 5.9e-18 94.0 82 56.1
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 5.9e-18 94.0 82 58.5
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 5.9e-18 94.0 57 75.4
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 5.9e-18 94.0 57 75.4
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 7.7e-18 93.6 57 77.2
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 1.3e-17 92.8 55 81.8
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 1.3e-17 92.8 71 66.2
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 5.0e-17 90.9 82 57.3
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 8.5e-17 90.1 71 63.4
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 1.5e-16 89.4 83 49.4
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 1.5e-16 89.4 72 63.9
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 2.5e-16 88.6 71 63.4
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 2.5e-16 88.6 71 63.4
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 4.2e-16 87.8 79 54.4
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 5.5e-16 87.4 68 61.8
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 7.2e-16 87.0 71 60.6
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 9.4e-16 86.7 62 62.9
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 9.4e-16 86.7 62 62.9
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 9.4e-16 86.7 81 55.6
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 2.1e-15 85.5 65 63.1
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 3.6e-15 84.7 64 57.8
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 1.4e-14 82.8 69 49.3
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 1.8e-14 82.4 73 56.2
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 2.3e-14 82.0 60 65.0
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 3.0e-14 81.6 63 63.5
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 4.0e-14 81.3 71 56.3
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 5.2e-14 80.9 71 54.9
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 6.8e-14 80.5 56 73.2
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 1.2e-13 79.7 76 59.2
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 1.5e-13 79.3 53 67.9
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 3.7e-12 74.7 53 56.6
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 4.8e-12 74.3 53 67.9
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 2.4e-11 72.0 57 59.6
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 9.1e-11 70.1 46 69.6
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 1.2e-10 69.7 66 50.0
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 4.5e-10 67.8 58 62.1
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 1.3e-09 66.2 61 45.9
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 2.2e-09 65.5 38 76.3
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 2.2e-09 65.5 52 61.5
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 3.2e-08 61.6 41 73.2
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 3.2e-08 61.6 49 63.3
PSO700G0322 Papaver somniferum HOM05D066428 ORTHO05D009711 4.7e-07 57.8 73 45.2
PSO170G0729 Papaver somniferum HOM05D066428 ORTHO05D009711 1.0e-06 56.6 61 49.2
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 6.8e-06 53.9 72 48.6
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 8.8e-06 53.5 51 51.0


User provided reference genes

Program Settings