Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g026411.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 8.7e-44 179.9 88 100.0
Solyc10g083067.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.3e-27 124.4 84 78.6
Solyc00g500376.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.8e-26 121.7 82 78.0
Solyc10g082061.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.7e-26 121.3 84 77.4
Sopen00g011700 Solanum pennellii HOM05D008169 ORTHO05D013631 7.6e-24 113.6 85 71.8
Solyc00g500236.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.2e-23 112.1 70 81.4
Sopen00g013200 Solanum pennellii HOM05D008169 ORTHO05D013631 2.2e-23 112.1 88 69.3
Sopen00g012860 Solanum pennellii HOM05D008169 ORTHO05D013631 2.9e-23 111.7 87 70.1
Sopen00g008990 Solanum pennellii HOM05D008169 ORTHO05D013631 4.9e-23 110.9 86 67.4
Solyc00g500365.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.1e-22 109.8 81 72.8
Sopen00g009220 Solanum pennellii HOM05D008169 ORTHO05D013631 1.9e-22 109.0 79 72.2
Sopen00g008840 Solanum pennellii HOM05D008169 ORTHO05D013631 7.1e-22 107.1 82 67.1
Sopen00g011670 Solanum pennellii HOM05D008169 ORTHO05D013631 4.6e-21 104.4 86 64.0
Solyc03g026416.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.3e-20 102.8 58 86.2
Sopen00g012010 Solanum pennellii HOM05D008169 ORTHO05D013631 1.8e-20 102.4 83 63.9
Solyc08g069235.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.1e-20 100.9 84 65.5
Solyc08g006253.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.1e-19 99.8 70 72.9
Solyc09g076057.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.3e-19 97.8 58 82.8
Sopen00g011590 Solanum pennellii HOM05D008169 ORTHO05D013631 4.3e-19 97.8 77 67.5
Solyc08g069240.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.7e-19 97.4 58 81.0
Sopen00g011020 Solanum pennellii HOM05D008169 ORTHO05D013631 7.4e-19 97.1 87 63.2
Solyc09g150102.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.3e-18 96.3 58 81.0
Solyc00g500380.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.6e-18 95.9 58 81.0
Sopen06g024680 Solanum pennellii HOM05D008169 ORTHO05D013631 2.8e-18 95.1 87 58.6
Solyc10g082062.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.7e-18 94.7 58 79.3
Solyc08g069234.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 6.3e-18 94.0 55 81.8
Solyc08g006257.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.8e-17 92.4 72 70.8
Solyc09g009733.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.8e-17 92.4 58 79.3
Sopen00g012960 Solanum pennellii HOM05D008169 ORTHO05D013631 2.4e-17 92.0 58 77.6
Solyc03g005397.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.1e-17 91.7 56 78.6
Solyc08g069239.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.3e-17 90.9 58 75.9
Solyc00g500356.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-16 89.7 90 55.6
Solyc03g124062.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.5e-16 89.4 67 71.6
Solyc01g004004.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.0e-16 89.0 60 76.7
Solyc09g098602.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.0e-16 89.0 61 73.8
Sopen09g030910 Solanum pennellii HOM05D008169 ORTHO05D013631 2.6e-16 88.6 85 56.5
Solyc07g005205.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.9e-16 87.4 58 74.1
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 1.0e-15 86.7 69 68.1
Solyc03g150130.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.3e-15 86.3 58 72.4
Solyc09g009736.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.2e-15 85.5 61 72.1
Sopen06g020570 Solanum pennellii HOM05D005671 ORTHO05D004497 5.0e-15 84.3 57 71.9
Sopen05g001640 Solanum pennellii HOM05D008169 ORTHO05D013631 1.4e-14 82.8 88 56.8
Solyc00g500355.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.2e-14 80.5 58 75.9
Sopen00g012220 Solanum pennellii HOM05D008169 ORTHO05D004497 7.2e-14 80.5 55 70.9
Solyc03g026412.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.7e-13 78.6 57 70.2
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.7e-13 78.6 51 74.5
Solyc01g150103.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 3.6e-13 78.2 50 76.0
Solyc10g083063.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.6e-13 77.8 48 79.2
Sopen03g006930 Solanum pennellii HOM05D008169 ORTHO05D000100 1.4e-12 76.3 65 61.5
Solyc03g150100.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.8e-12 75.9 99 47.5
Solyc03g004000.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 8.8e-12 73.6 58 67.2
Sopen07g025120 Solanum pennellii HOM05D008169 ORTHO05D013631 5.7e-11 70.9 70 55.7
Solyc09g072500.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.3e-10 69.7 58 60.3
Solyc03g004003.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.1e-09 66.6 59 61.0
Sopen00g006440 Solanum pennellii HOM05D008169 ORTHO05D013631 4.1e-09 64.7 65 55.4
Solyc04g012200.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.0e-08 62.4 42 76.2
Solyc03g026414.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.5e-08 61.2 41 73.2
Solyc03g124064.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 4.5e-08 61.2 53 62.3
Solyc04g011330.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 7.7e-08 60.5 38 76.3
Sopen00g012730 Solanum pennellii HOM05D005671 ORTHO05D004497 7.7e-08 60.5 34 82.4
Solyc03g005395.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-07 59.3 54 57.4
Solyc10g005485.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 2.9e-07 58.5 109 41.3
Sopen10g008280 Solanum pennellii HOM05D008169 ORTHO05D009932 6.5e-07 57.4 55 56.4


User provided reference genes

Program Settings