Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 4.1e-164 581.3 282 100.0
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 5.4e-156 554.3 282 96.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.9e-149 531.9 285 92.6
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 5.3e-119 431.4 283 75.6
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.7e-106 387.9 286 70.6
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.3e-103 378.3 285 69.1
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 2.0e-86 323.2 284 58.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.7e-86 322.8 289 62.6
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.4e-84 314.3 287 62.4
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.1e-79 300.8 284 61.6
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 2.7e-78 296.2 191 72.8
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.9e-76 290.0 279 58.8
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 3.3e-76 289.3 279 56.3
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 4.2e-76 288.9 271 57.6
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 4.0e-74 282.3 282 56.7
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.5e-73 280.4 234 60.3
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 2.6e-73 279.6 268 55.6
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 5.7e-73 278.5 235 61.3
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 9.8e-73 277.7 188 70.2
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 6.4e-72 275.0 204 66.2
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 1.1e-71 274.2 189 68.3
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.4e-71 273.1 221 62.0
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 3.2e-71 272.7 221 61.5
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.2e-70 270.8 226 61.9
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 5.9e-70 268.5 196 65.3
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 7.8e-70 268.1 268 52.2
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.5e-68 263.1 195 66.2
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 2.5e-68 263.1 190 65.8
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 7.3e-68 261.5 228 60.5
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 7.3e-68 261.5 239 58.2
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 9.5e-68 261.2 256 56.2
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.6e-67 260.4 268 52.6
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.6e-67 260.4 212 62.3
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 2.1e-67 260.0 190 65.8
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 2.1e-67 260.0 284 51.8
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.8e-67 259.6 212 62.3
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.8e-67 259.6 216 63.0
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 3.6e-67 259.2 227 66.1
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 3.6e-67 259.2 227 59.0
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-66 257.3 212 61.8
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.3e-66 256.5 212 61.3
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.1e-66 256.1 212 61.8
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 3.1e-66 256.1 232 53.9
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.2e-66 255.4 212 61.8
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 8.9e-66 254.6 212 60.8
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.2e-65 254.2 247 54.7
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.6e-65 253.1 229 59.0
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.6e-65 253.1 204 59.8
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 2.6e-65 253.1 273 50.2
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 2.6e-65 253.1 225 57.8
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 3.4e-65 252.7 204 59.8
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 4.4e-65 252.3 204 63.7
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 9.8e-65 251.1 199 64.8
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 9.8e-65 251.1 192 63.5
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.7e-64 250.4 191 62.8
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.7e-64 250.4 262 51.9
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 2.2e-64 250.0 189 64.0
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 4.9e-64 248.8 191 62.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 4.9e-64 248.8 218 59.6
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 8.3e-64 248.1 189 64.0
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.4e-63 247.3 186 65.1
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.4e-63 247.3 199 63.8
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.4e-63 246.5 188 62.8
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.4e-63 246.5 235 54.5
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 5.4e-63 245.4 232 53.9
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 2.0e-62 243.4 201 61.7
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 2.7e-62 243.0 191 61.8
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 6.0e-62 241.9 241 53.1
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 7.8e-62 241.5 195 63.6
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 7.3e-60 235.0 191 60.7
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.6e-59 233.8 225 53.8
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 4.7e-59 232.3 225 53.8
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 4.7e-59 232.3 225 53.8
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.1e-58 231.1 213 55.4
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.8e-58 230.3 191 58.1
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 3.1e-58 229.6 199 57.3
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 5.2e-58 228.8 205 57.1
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 6.8e-58 228.4 199 56.3
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 8.9e-58 228.0 208 54.3
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.2e-57 227.6 208 54.3
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 2.0e-57 226.9 188 58.5
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 2.0e-57 226.9 188 60.6
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.3e-56 224.2 199 55.8
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 2.9e-56 223.0 242 50.0
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 2.9e-56 223.0 225 51.6
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 3.7e-56 222.6 188 57.4
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.1e-55 221.1 196 56.6
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 1.1e-55 221.1 227 51.5
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.9e-55 220.3 245 48.6
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.9e-55 220.3 242 48.3
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 2.4e-55 219.9 157 65.0
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.1e-54 216.9 247 47.8
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 1.0e-53 214.5 189 56.1
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.3e-53 214.2 220 53.2
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.1e-53 212.2 201 54.2
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 3.6e-51 206.1 222 51.8
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.2e-49 201.1 146 67.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.2e-48 196.8 217 47.0
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 8.4e-48 194.9 144 66.7
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.2e-46 191.0 281 43.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.1e-44 184.5 188 48.9
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 9.9e-41 171.4 176 55.7
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.1e-36 157.9 142 59.2
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.5e-36 157.5 117 66.7
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 3.3e-36 156.4 181 45.9
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 3.1e-34 149.8 188 43.6
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.6e-33 145.2 131 57.3
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 2.9e-32 143.3 142 54.9
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 5.4e-31 139.0 155 49.7
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 4.6e-30 136.0 146 50.0
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.1e-28 131.3 121 56.2
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.5e-28 131.0 116 59.5
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 2.6e-25 120.2 129 53.5
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.9e-24 115.9 112 55.4
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 8.4e-24 115.2 126 50.8
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 7.9e-22 108.6 128 51.6
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.0e-21 108.2 77 64.9
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.2e-19 99.0 95 57.9
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-16 90.9 112 38.4
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 1.9e-15 87.4 221 30.8
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 1.9e-15 87.4 85 55.3
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 3.1e-10 70.1 46 67.4
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.5e-08 62.4 66 50.0
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 8.4e-08 62.0 276 22.5
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.4e-07 61.2 64 51.6


User provided reference genes

Program Settings