Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g025630.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 3.6e-67 258.1 127 100.0
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 3.6e-67 258.1 127 100.0
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 1.6e-59 232.6 139 84.9
Nitab4.5_0005845g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.1e-58 228.4 139 82.0
Peaxi162Scf00444g00722 Petunia axillaris HOM05D001607 ORTHO05D001893 4.0e-58 228.0 139 81.3
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 3.1e-50 201.8 146 71.9
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.0e-50 201.4 138 73.2
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 5.2e-50 201.1 128 77.3
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.2e-49 199.9 138 72.5
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 1.5e-49 199.5 139 71.2
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.0e-49 199.1 138 72.5
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 5.8e-49 197.6 146 69.2
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 7.6e-49 197.2 139 70.5
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 9.9e-49 196.8 139 69.8
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.2e-48 195.7 144 68.8
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 2.2e-48 195.7 139 68.3
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 4.9e-48 194.5 149 69.1
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 6.4e-48 194.1 129 73.6
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 6.4e-48 194.1 149 68.5
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.4e-48 193.7 150 68.0
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 2.4e-47 192.2 150 66.0
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 3.2e-47 191.8 150 66.0
Gohir.D08G110708 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.2e-47 191.8 150 67.3
Gorai.004G118400 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.2e-47 191.8 150 67.3
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 4.2e-47 191.4 138 68.8
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 5.4e-47 191.0 135 68.9
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.2e-46 189.9 143 66.4
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 1.2e-46 189.9 150 66.0
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 1.2e-46 189.9 131 71.0
unitig_46.g18793 Utricularia gibba HOM05D001607 ORTHO05D001893 1.6e-46 189.5 140 67.1
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 6.0e-46 187.6 138 68.1
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 7.8e-46 187.2 141 66.7
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.7e-45 186.0 134 67.9
Hund04843 Selenicereus undatus HOM05D001607 ORTHO05D001893 1.7e-45 186.0 140 65.7
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 2.3e-45 185.7 143 67.1
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 3.9e-45 184.9 151 64.2
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 3.9e-45 184.9 142 66.2
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 5.1e-45 184.5 142 65.5
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 6.6e-45 184.1 143 65.7
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.7e-45 183.7 162 59.3
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 8.7e-45 183.7 150 68.0
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 8.7e-45 183.7 149 63.1
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.5e-44 183.0 149 62.4
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.9e-44 182.6 150 62.0
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.5e-44 182.2 149 62.4
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 2.5e-44 182.2 129 70.5
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.3e-44 181.4 149 61.7
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 5.6e-44 181.0 140 67.1
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 5.6e-44 181.0 149 61.7
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.6e-44 181.0 149 61.7
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.6e-44 181.0 149 61.7
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 7.3e-44 180.6 150 60.0
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 1.6e-43 179.5 146 63.7
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 1.6e-43 179.5 140 64.3
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.1e-43 179.1 149 61.1
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 2.1e-43 179.1 149 64.4
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 2.8e-43 178.7 150 62.0
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 3.6e-43 178.3 147 61.2
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.6e-43 178.3 158 60.8
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 4.8e-43 177.9 133 66.9
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 6.2e-43 177.6 140 63.6
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 6.2e-43 177.6 149 63.1
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 6.2e-43 177.6 141 66.7
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 8.1e-43 177.2 129 66.7
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 1.1e-42 176.8 155 60.6
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.1e-42 176.8 140 61.4
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-42 176.4 130 66.9
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 1.4e-42 176.4 130 66.9
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 1.4e-42 176.4 130 66.9
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.4e-42 176.4 149 60.4
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.8e-42 176.0 138 66.7
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.8e-42 176.0 139 65.5
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 3.1e-42 175.3 139 65.5
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 3.1e-42 175.3 163 57.1
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 3.1e-42 175.3 140 61.4
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 5.3e-42 174.5 134 64.9
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 6.9e-42 174.1 162 58.0
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 6.9e-42 174.1 150 58.7
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 6.9e-42 174.1 132 65.2
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 6.9e-42 174.1 148 60.1
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 9.0e-42 173.7 149 60.4
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 9.0e-42 173.7 133 65.4
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 9.0e-42 173.7 140 63.6
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 9.0e-42 173.7 163 58.9
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 9.0e-42 173.7 132 64.4
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 2.0e-41 172.6 133 64.7
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 2.0e-41 172.6 149 61.1
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 2.6e-41 172.2 133 65.4
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 3.4e-41 171.8 133 63.9
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 7.6e-41 170.6 149 61.1
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 9.9e-41 170.2 146 61.6
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.3e-40 169.9 146 60.3
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 1.3e-40 169.9 135 63.7
CDE08G1124 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 2.2e-40 169.1 143 61.5
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.9e-40 168.7 153 56.9
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 2.9e-40 168.7 160 58.8
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 2.9e-40 168.7 149 58.4
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 2.9e-40 168.7 150 60.7
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 2.9e-40 168.7 133 63.2
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 4.9e-40 167.9 134 63.4
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 6.4e-40 167.5 132 63.6
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 8.4e-40 167.2 135 63.0
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 8.4e-40 167.2 146 61.0
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 2.4e-39 165.6 145 60.0
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 5.4e-39 164.5 151 58.3
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 7.1e-39 164.1 141 59.6
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 7.1e-39 164.1 141 59.6
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 7.1e-39 164.1 153 54.2
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.2e-38 163.3 147 57.8
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 2.1e-38 162.5 153 54.9
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 2.7e-38 162.2 147 57.1
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.5e-38 161.8 151 57.6
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 7.9e-38 160.6 129 59.7
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 1.0e-37 160.2 150 55.3
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 1.0e-37 160.2 142 60.6
QL09p013882 Quercus lobata HOM05D001607 ORTHO05D001893 1.8e-37 159.5 99 74.7
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 3.0e-37 158.7 144 60.4
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 3.9e-37 158.3 151 56.3
vmacro06667 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 5.1e-37 157.9 128 63.3
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 8.7e-37 157.1 135 58.5
Ca_27533_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 2.1e-35 152.5 131 62.6
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.8e-35 152.1 93 72.0
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 2.2e-32 142.5 168 42.9
arahy.Tifrunner.gnm1.ann1.7UXB07 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.9e-32 142.1 105 62.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 3.8e-32 141.7 115 61.7
BcaNung05685 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-31 139.8 93 67.7
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.9e-31 139.4 135 54.1
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.7e-30 135.6 93 66.7
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 6.0e-30 134.4 129 57.4
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 8.7e-29 130.6 154 45.5
arahy.Tifrunner.gnm1.ann1.B9FIPF Arachis hypogaea HOM05D001607 ORTHO05D001893 3.3e-28 128.6 93 65.6
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.6e-27 126.3 128 54.7
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 2.1e-27 125.9 100 55.0
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 3.1e-26 122.1 135 45.2
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 4.6e-22 108.2 93 49.5
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 1.4e-18 96.7 80 62.5
COL.COLO4_14279 Corchorus olitorius HOM05D000257 ORTHO05D009129 4.5e-17 91.7 53 75.5
PGSC0003DMG400019983 Solanum tuberosum HOM05D001607 ORTHO05D000214 5.5e-15 84.7 42 90.5
MELO3C034501.2 Cucumis melo HOM05D001607 ORTHO05D001893 1.6e-14 83.2 58 63.8
SEGI_36427 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 5.7e-12 74.7 101 43.6
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 3.8e-08 62.0 119 31.9
SHI13772 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-07 60.1 73 46.6


User provided reference genes

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