Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-106 389.8 180 100.0
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-88 330.1 160 93.8
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-88 329.7 160 93.8
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.7e-83 310.5 147 93.9
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-82 309.7 147 93.9
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.6e-76 288.1 154 81.8
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.9e-75 285.0 147 87.1
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.3e-74 282.0 147 84.4
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 3.6e-68 261.9 154 74.0
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 2.5e-66 255.8 147 77.6
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.8e-65 251.5 148 77.7
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.1e-64 248.8 148 76.4
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.1e-61 240.4 147 74.8
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 9.4e-61 237.3 147 74.8
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-60 236.9 130 77.7
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.4e-56 222.6 154 68.2
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.9e-55 218.0 154 66.9
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 2.9e-54 215.7 173 61.3
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.9e-54 215.7 147 67.3
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 3.8e-54 215.3 148 67.6
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.8e-54 215.3 154 65.6
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 3.0e-51 205.7 120 70.8
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 5.3e-48 194.9 127 66.9
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.7e-44 182.6 155 60.0
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.2e-41 171.0 209 46.4
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 2.0e-39 166.4 153 56.2
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 1.3e-38 163.7 199 48.7
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 2.2e-38 162.9 124 60.5
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.2e-38 162.9 125 60.0
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 1.1e-37 160.6 167 52.1
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.6e-36 156.8 129 57.4
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.7e-36 155.2 163 45.4
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.0e-35 154.1 151 54.3
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 8.8e-35 151.0 97 69.1
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.6e-28 130.2 151 49.0
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 8.0e-28 127.9 128 48.4
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.4e-27 127.1 152 48.7
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.0e-27 125.9 151 45.0
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 5.4e-24 115.2 210 32.9
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.2e-16 89.4 126 42.9
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.9e-13 80.1 83 45.8
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-10 70.9 78 42.3
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.4e-08 63.9 67 44.8
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 4.1e-08 62.4 82 42.7
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 5.4e-08 62.0 67 43.3
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 5.4e-08 62.0 67 43.3
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.2e-07 60.8 73 39.7
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 2.7e-07 59.7 76 35.5
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.0e-06 57.8 82 37.8


User provided reference genes

Program Settings