Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.7e-123 444.1 202 100.0
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.3e-114 414.1 202 92.1
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 8.2e-114 413.7 186 99.5
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.7e-98 362.8 206 82.5
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.2e-98 362.5 206 81.6
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 4.5e-96 354.8 207 80.7
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.5e-94 349.0 198 77.8
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.5e-94 347.8 207 78.7
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 9.4e-94 347.1 198 78.8
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 8.0e-93 344.0 205 77.1
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 3.3e-78 295.4 202 68.8
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 5.5e-78 294.7 227 63.0
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.3e-74 280.8 203 66.0
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.3e-74 280.8 203 66.0
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.1e-73 278.5 203 65.0
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 7.8e-72 274.2 184 65.8
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 2.9e-71 272.3 165 71.5
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.6e-64 250.0 148 77.7
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 2.7e-64 249.2 147 78.9
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.3e-62 242.3 147 76.9
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.3e-62 241.9 147 76.2
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.1e-60 237.3 143 74.8
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 2.0e-59 233.0 145 75.2
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 6.6e-55 218.0 193 54.4
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.5e-51 206.8 181 50.3
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 1.7e-50 203.4 168 55.4
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 6.0e-48 194.9 225 47.1
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 5.1e-47 191.8 200 51.0
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.0e-44 182.2 218 46.8
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.8e-44 181.4 215 43.7
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 8.7e-39 164.5 219 39.7
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 5.8e-35 151.8 109 65.1
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 9.9e-35 151.0 149 54.4
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 6.4e-34 148.3 209 41.1
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 7.8e-32 141.4 130 53.8
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.8e-29 132.9 148 51.4
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.5e-27 127.1 148 49.3
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-26 124.0 150 48.0
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 2.1e-24 116.7 128 46.9
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 2.7e-24 116.3 132 40.9
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 1.1e-22 110.9 76 57.9
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 2.3e-15 86.7 56 66.1
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 8.7e-15 84.7 54 66.7
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.5e-14 84.0 60 60.0
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 1.9e-14 83.6 54 63.0
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.9e-14 83.6 85 41.2
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.5e-14 83.2 56 62.5
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 4.3e-14 82.4 56 62.5
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 4.3e-14 82.4 56 62.5
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 5.7e-14 82.0 56 60.7
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 7.4e-14 81.6 123 43.1
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 1.6e-13 80.5 51 66.7
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.6e-13 80.5 58 58.6
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 2.1e-13 80.1 58 56.9
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.1e-13 80.1 56 60.7
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 8.2e-13 78.2 54 57.4
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.1e-12 77.8 56 57.1
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 1.8e-12 77.0 56 58.9
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 5.3e-12 75.5 56 60.7
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.2e-11 74.3 56 53.6
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.0e-10 71.2 51 58.8
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 5.5e-09 65.5 41 68.3
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.6e-08 63.9 56 50.0
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 2.1e-08 63.5 60 46.7
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 4.6e-08 62.4 60 45.0
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 2.3e-07 60.1 60 43.3
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 5.1e-07 58.9 55 49.1
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 5.1e-07 58.9 51 54.9
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 6.7e-07 58.5 52 50.0
arahy.Tifrunner.gnm1.ann1.GT4ITC Arachis hypogaea HOM05D007628 ORTHO05D007342 8.7e-07 58.2 64 48.4
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 8.7e-07 58.2 55 50.9
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 1.1e-06 57.8 53 50.9
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.5e-06 57.4 55 49.1
arahy.Tifrunner.gnm1.ann1.L82REB Arachis hypogaea HOM05D007628 ORTHO05D007342 2.5e-06 56.6 64 46.9
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 3.3e-06 56.2 52 51.9
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 3.3e-06 56.2 63 47.6
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 4.3e-06 55.8 55 49.1
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 4.3e-06 55.8 38 65.8
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 4.3e-06 55.8 62 45.2
unitig_8.g5066 Utricularia gibba HOM05D007628 ORTHO05D007342 4.3e-06 55.8 51 43.1
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 5.7e-06 55.5 57 47.4


User provided reference genes

Program Settings