Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 9.3e-129 463.4 208 100.0
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.1e-127 457.6 208 98.1
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.3e-117 426.4 190 98.9
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.2e-113 411.4 208 88.9
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 3.0e-87 325.5 229 68.1
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 1.8e-79 299.7 203 66.5
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 4.4e-78 295.0 203 66.0
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.4e-78 295.0 203 68.5
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.4e-78 295.0 203 68.5
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 9.7e-78 293.9 203 66.0
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.5e-75 285.0 203 67.0
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-74 283.1 203 66.0
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.2e-74 282.7 172 73.8
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.9e-74 282.3 204 64.2
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 1.1e-73 280.4 204 67.6
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.5e-73 280.0 204 62.7
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 5.2e-71 271.6 165 70.9
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 9.5e-57 224.2 175 64.0
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.0e-55 218.8 154 66.9
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 4.0e-55 218.8 154 66.9
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 1.7e-53 213.4 243 45.7
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.2e-53 213.0 154 65.6
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.9e-53 211.8 154 65.6
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 1.9e-52 209.9 153 61.4
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.3e-50 203.8 153 63.4
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 5.8e-46 188.3 213 46.0
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.5e-43 179.1 172 47.7
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.5e-43 179.1 201 45.3
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 1.2e-40 170.6 226 41.2
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.0e-39 165.6 187 45.5
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.4e-37 158.3 217 39.2
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 7.8e-35 151.4 208 39.9
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.5e-33 146.4 206 35.4
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 8.4e-29 131.3 147 44.2
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.0e-26 124.4 118 50.0
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 3.0e-26 122.9 78 71.8
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 7.3e-25 118.2 158 42.4
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.4e-23 113.2 114 47.4
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 9.9e-22 107.8 142 40.8
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 4.2e-20 102.4 118 41.5
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 3.6e-16 89.4 113 39.8
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.4e-12 76.6 54 64.8
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 9.3e-12 74.7 54 61.1
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.6e-11 73.9 130 35.4
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 2.1e-11 73.6 62 51.6
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 4.6e-11 72.4 54 61.1
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 4.6e-11 72.4 55 50.9
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.6e-11 72.4 83 41.0
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.3e-10 70.9 60 53.3
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.3e-10 70.9 56 51.8
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.3e-10 70.9 56 51.8
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 1.8e-10 70.5 55 56.4
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.8e-10 70.5 51 60.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.3e-10 70.1 51 60.8
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.3e-10 70.1 56 51.8
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 5.1e-10 68.9 51 60.8
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 5.1e-10 68.9 53 60.4
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 8.7e-10 68.2 51 60.8
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 2.5e-09 66.6 55 52.7
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 3.3e-09 66.2 53 54.7
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.3e-08 64.3 56 50.0
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.6e-08 63.9 203 28.1
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.1e-07 61.2 48 56.2
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 1.8e-07 60.5 48 56.2
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 2.4e-07 60.1 44 61.4
Cc10_g10240 Coffea canephora HOM05D007628 ORTHO05D007342 1.5e-06 57.4 49 61.2
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 3.4e-06 56.2 54 51.9
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 5.8e-06 55.5 51 49.0
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 5.8e-06 55.5 60 46.7
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 5.8e-06 55.5 52 50.0
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 9.9e-06 54.7 52 50.0


User provided reference genes

Program Settings