Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.2e-128 463.0 208 100.0
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.7e-127 457.2 208 98.1
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 3.1e-116 421.8 190 97.4
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 7.9e-112 407.1 208 87.5
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 1.1e-86 323.6 229 67.7
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 8.8e-79 297.4 203 65.5
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 2.8e-77 292.4 203 65.0
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.8e-77 292.4 203 67.5
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.8e-77 292.4 203 67.5
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.3e-77 291.2 203 65.0
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.9e-74 282.3 203 66.0
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-73 280.4 203 65.0
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.9e-73 279.6 204 63.2
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.9e-73 279.6 172 72.7
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 9.4e-73 277.3 204 66.7
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 9.4e-73 277.3 204 61.8
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-70 270.0 165 70.3
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 3.6e-56 222.2 175 63.4
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.4e-54 215.7 154 65.6
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 3.4e-54 215.7 154 65.6
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 3.7e-53 212.2 243 45.3
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.9e-52 209.9 154 64.3
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.9e-52 209.9 154 64.9
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 9.2e-52 207.6 153 60.8
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 8.6e-50 201.1 153 62.1
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 3.7e-45 185.7 213 45.1
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.0e-42 176.0 201 44.3
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.5e-41 173.7 176 46.0
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 1.8e-39 166.8 226 39.8
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.9e-39 164.5 187 44.9
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.9e-36 156.8 217 38.7
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 5.1e-34 148.7 208 39.4
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 9.5e-33 144.4 206 35.0
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 3.2e-28 129.4 147 43.5
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 3.0e-26 122.9 78 71.8
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.9e-26 122.5 118 49.2
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.6e-24 115.9 158 41.8
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.2e-24 115.2 114 48.2
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.6e-22 109.8 142 41.5
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-19 100.9 118 40.7
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 6.2e-16 88.6 113 39.8
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.4e-12 76.6 54 64.8
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 9.3e-12 74.7 54 61.1
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 2.1e-11 73.6 62 51.6
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.5e-11 72.8 130 34.6
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 4.6e-11 72.4 54 61.1
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 4.6e-11 72.4 55 50.9
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.3e-10 70.9 60 53.3
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.3e-10 70.9 56 51.8
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.3e-10 70.9 56 51.8
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 1.8e-10 70.5 55 56.4
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.8e-10 70.5 51 60.8
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.3e-10 70.1 83 39.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.3e-10 70.1 51 60.8
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.3e-10 70.1 56 51.8
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 5.1e-10 68.9 51 60.8
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 5.1e-10 68.9 53 60.4
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 8.7e-10 68.2 51 60.8
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.9e-09 67.0 203 29.1
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 2.5e-09 66.6 55 52.7
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 3.3e-09 66.2 53 54.7
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.3e-08 64.3 56 50.0
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.1e-07 61.2 48 56.2
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 1.8e-07 60.5 48 56.2
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 2.4e-07 60.1 44 61.4
Cc10_g10240 Coffea canephora HOM05D007628 ORTHO05D007342 1.5e-06 57.4 49 61.2
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 3.4e-06 56.2 54 51.9
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 5.8e-06 55.5 51 49.0
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 5.8e-06 55.5 60 46.7
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 5.8e-06 55.5 52 50.0
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 9.9e-06 54.7 52 50.0


User provided reference genes

Program Settings