Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g013620.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.0e-83 312.4 161 100.0
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 7.1e-68 260.8 150 92.0
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 7.1e-68 260.8 150 92.0
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 1.2e-67 260.0 150 91.3
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 1.0e-66 256.9 150 90.0
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 3.0e-66 255.4 150 90.7
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-65 252.7 150 87.3
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-65 252.7 150 87.3
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-65 252.7 150 87.3
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-65 252.7 150 87.3
HanXRQChr11g0323711 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-65 252.7 150 87.3
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 1.9e-65 252.7 150 87.3
Solyc01g017090.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.1e-64 249.2 150 86.0
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 2.8e-64 248.8 150 84.7
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 3.1e-63 245.4 150 83.3
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 2.9e-61 238.8 150 80.7
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 6.4e-61 237.7 150 80.0
MELO3C027417.2 Cucumis melo HOM05D001750 ORTHO05D001825 1.4e-60 236.5 150 78.7
SalBow1G5472 Salvia bowleyana HOM05D001750 ORTHO05D001825 4.2e-60 235.0 150 78.7
RcHm_v2.0_CPg0502851 Rosa chinensis HOM05D001750 ORTHO05D001825 2.7e-59 232.3 150 79.3
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 3.5e-59 231.9 150 77.3
Medtr4g006150 Medicago truncatula HOM05D001750 ORTHO05D001825 1.0e-58 230.3 150 77.3
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 1.0e-58 230.3 150 77.3
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 1.0e-58 230.3 150 77.3
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.0e-58 230.3 150 77.3
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 1.3e-58 229.9 150 77.3
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.3e-58 229.9 150 77.3
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 8.7e-58 227.3 150 76.7
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 8.7e-58 227.3 150 76.7
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.1e-57 226.9 150 76.7
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.5e-57 226.5 150 76.7
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-57 225.3 150 75.3
BraSC138t45539Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-57 225.3 150 75.3
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-57 225.3 150 75.3
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-57 225.3 150 75.3
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 3.3e-57 225.3 150 75.3
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.3e-57 224.9 150 76.0
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 5.6e-57 224.6 150 75.3
AL7G50350 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 9.6e-57 223.8 150 74.7
BolSC29t60501H Brassica oleracea HOM05D001750 ORTHO05D001825 9.6e-57 223.8 150 75.3
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 9.6e-57 223.8 150 75.3
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 9.6e-57 223.8 150 75.3
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 9.6e-57 223.8 150 75.3
BolSC46t60963H Brassica oleracea HOM05D001750 ORTHO05D001825 9.6e-57 223.8 150 75.3
Gohir.1Z049579 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.3e-56 223.4 150 75.3
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 2.1e-56 222.6 150 76.0
BolC6t36206H Brassica oleracea HOM05D001750 ORTHO05D001825 1.1e-55 220.3 158 72.2
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.4e-55 219.9 138 81.9
Potri.011G084150 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.4e-55 219.9 150 74.7
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 4.5e-54 214.9 152 75.0
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 3.8e-53 211.8 152 74.3
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 4.9e-53 211.5 150 74.0
PGSC0003DMG400020529 Solanum tuberosum HOM05D000729 ORTHO05D001063 2.4e-52 209.1 151 80.1
Gorai.013G022800 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.2e-52 208.4 150 70.7
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 2.1e-51 206.1 150 76.0
Nitab4.5_0007400g0030 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.1e-47 193.7 158 70.9
BolSC49t61138H Brassica oleracea HOM05D001750 ORTHO05D001825 6.9e-47 191.0 130 73.8
Lalb_Chr07g0191711 Lupinus albus HOM05D001750 ORTHO05D001825 1.2e-43 180.3 124 73.4
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 6.0e-43 177.9 102 91.2
Gohir.D13G020450 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.5e-41 172.6 119 71.4
Gorai.006G035300 Gossypium raimondii HOM05D001750 ORTHO05D001825 3.3e-41 172.2 121 74.4
Eucgr.B00850 Eucalyptus grandis HOM05D001750 ORTHO05D001825 5.8e-38 161.4 111 73.9
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 1.4e-36 156.8 112 70.5
Lalb_Chr16g0388561 Lupinus albus HOM05D001750 ORTHO05D001825 3.3e-33 145.6 99 74.7
Solyc11g021195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 1.2e-30 137.1 105 75.2
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 5.0e-29 131.7 88 79.5
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 6.7e-26 121.3 141 51.1
HanXRQChr00c0718g0577001 Helianthus annuus HOM05D001750 ORTHO05D001825 6.3e-24 114.8 106 65.1
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 3.1e-23 112.5 123 56.1
SMO086G0048 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 6.9e-23 111.3 154 41.6
Solyc02g032320.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.2e-20 102.4 55 96.4
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 4.2e-20 102.1 72 70.8
Hund04278 Selenicereus undatus HOM05D001750 ORTHO05D001825 2.7e-19 99.4 74 67.6
Gohir.A04G039180 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.8e-18 96.7 55 89.1
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.8e-18 96.7 55 89.1
CAN.G8.25 Capsicum annuum HOM05D001750 ORTHO05D001825 1.1e-17 94.0 60 81.7
Hma1.2p1_0472F.1_g159730 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 7.4e-17 91.3 48 93.8
Gohir.D02G112150 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.1e-15 85.5 61 70.5
Hma1.2p1_0066F.1_g036370 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 2.2e-13 79.7 40 95.0
Thhalv10024000m.g Eutrema salsugineum HOM05D001750 ORTHO05D001825 1.1e-12 77.4 73 54.8
Gorai.005G170400 Gossypium raimondii HOM05D001750 ORTHO05D001825 6.1e-11 71.6 49 65.3
Psat0s3763g0040 Pisum sativum HOM05D001750 ORTHO05D001825 6.1e-11 71.6 36 94.4
Gohir.D02G151844 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.0e-10 70.9 49 65.3
Gorai.005G127100 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.1e-09 67.4 36 88.9
Solyc11g021190.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.6e-09 66.2 36 91.7
Nitab4.5_0007979g0040 Nicotiana tabacum HOM05D000729 ORTHO05D002596 1.3e-08 63.9 46 71.7
HanXRQChr00c0328g0573591 Helianthus annuus HOM05D001750 ORTHO05D001825 9.1e-07 57.8 62 54.8
Psat0s8829g0080 Pisum sativum HOM05D001750 ORTHO05D001825 2.0e-06 56.6 40 65.0
arahy.Tifrunner.gnm1.ann1.GEK8SS Arachis hypogaea HOM05D001750 ORTHO05D001825 3.5e-06 55.8 40 65.0


User provided reference genes

Program Settings