Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.7e-89 332.0 177 100.0
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 4.2e-82 308.1 177 94.4
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 4.2e-82 308.1 177 94.4
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 4.2e-82 308.1 177 94.4
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.3e-78 296.6 177 91.0
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 4.1e-77 291.6 177 87.6
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 5.6e-74 281.2 177 87.6
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 7.3e-74 280.8 177 85.3
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 84.7
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 84.7
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 84.7
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.2e-73 280.0 177 85.3
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 1.6e-73 279.6 177 84.2
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 1.4e-72 276.6 177 84.7
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 1.4e-72 276.6 177 84.7
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.3e-72 275.8 177 83.6
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 2.3e-72 275.8 177 84.2
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.0e-72 275.0 177 84.2
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 4.0e-72 275.0 177 84.2
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 4.0e-72 275.0 177 84.2
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 6.8e-72 274.2 177 83.6
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 2.6e-71 272.3 177 83.6
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 3.4e-71 271.9 177 83.1
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 4.4e-71 271.6 177 83.1
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 5.8e-71 271.2 177 84.7
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 2.2e-70 269.2 177 81.9
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 5.4e-69 264.6 176 81.2
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 9.2e-69 263.8 177 79.7
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 2.0e-68 262.7 176 80.7
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 3.5e-68 261.9 177 80.8
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 6.0e-68 261.2 177 79.7
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 1.3e-67 260.0 177 78.5
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 8.6e-67 257.3 177 78.5
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 1.9e-66 256.1 177 78.0
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 5.6e-66 254.6 176 80.1
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 1.5e-63 246.5 177 75.1
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.5e-63 244.2 153 83.0
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 1.7e-62 243.0 168 80.4
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.2e-60 236.9 162 78.4
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 3.0e-59 232.3 141 88.7
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.5e-58 229.9 137 91.2
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.3e-58 227.6 152 80.9
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-49 200.3 161 72.0
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 4.0e-48 195.3 150 74.0
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 5.2e-48 194.9 119 87.4
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 7.3e-42 174.5 124 76.6
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 1.3e-41 173.7 116 77.6
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 2.6e-39 166.0 99 83.8
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 1.7e-38 163.3 99 82.8
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 2.9e-38 162.5 116 72.4
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 6.4e-38 161.4 177 60.5
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 2.4e-37 159.5 108 78.7
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 3.2e-37 159.1 112 75.9
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 3.2e-37 159.1 99 80.8
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-36 157.1 107 78.5
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-36 157.1 107 78.5
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 1.2e-36 157.1 107 78.5
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.1e-34 150.6 163 54.6
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-34 149.8 99 77.8
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 4.0e-32 142.1 128 60.9
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 5.3e-32 141.7 99 77.8
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 5.3e-32 141.7 93 77.4
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 9.0e-32 141.0 98 75.5
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 3.4e-31 139.0 153 60.1
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 9.9e-31 137.5 94 71.3
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 9.9e-31 137.5 90 86.7
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 1.7e-30 136.7 100 75.0
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.7e-30 136.7 84 89.3
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 1.3e-27 127.1 109 67.9
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 2.3e-27 126.3 74 79.7
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 2.3e-27 126.3 74 79.7
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-27 125.9 84 82.1
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.0e-27 125.9 95 66.3
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 3.3e-26 122.5 84 77.4
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.7e-25 119.0 76 81.6
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 1.0e-22 110.9 77 83.1
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 2.9e-22 109.4 75 70.7
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 8.4e-22 107.8 67 74.6
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 1.2e-20 104.0 60 90.0
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 7.9e-20 101.3 74 74.3
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 7.9e-20 101.3 74 74.3
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 7.9e-20 101.3 74 74.3
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 6.7e-19 98.2 83 71.1
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 3.3e-18 95.9 176 43.8
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 2.1e-17 93.2 65 76.9
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 3.4e-15 85.9 56 76.8
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 3.8e-14 82.4 99 46.5
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 1.9e-13 80.1 81 66.7
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 9.3e-13 77.8 85 61.2
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 2.7e-12 76.3 56 78.6
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 1.3e-09 67.4 60 66.7
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 4.8e-09 65.5 45 75.6
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 6.3e-09 65.1 70 57.1
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 3.4e-07 59.3 51 58.8
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 5.9e-07 58.5 42 73.8


User provided reference genes

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