Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 2.2e-162 575.5 274 100.0
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.5e-46 190.7 401 31.4
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 5.4e-44 182.2 428 31.1
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 5.4e-44 182.2 428 31.1
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 1.0e-42 177.9 423 29.8
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.5e-41 173.3 435 29.2
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 4.3e-41 172.6 429 28.4
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 5.3e-39 165.6 257 36.2
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 2.9e-37 159.8 417 29.5
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 1.1e-36 157.9 426 28.2
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.9e-36 157.1 423 28.4
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.9e-36 157.1 423 28.4
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.9e-36 157.1 423 28.4
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.6e-35 152.5 390 28.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 4.6e-35 152.5 254 36.2
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 1.8e-34 150.6 372 30.4
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 3.0e-34 149.8 425 27.5
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 3.7e-32 142.9 352 29.5
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 6.2e-32 142.1 380 28.9
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 1.5e-30 137.5 344 30.2
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.7e-29 134.0 147 44.2
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 2.2e-29 133.7 363 27.8
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 3.8e-29 132.9 307 30.9
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 2.5e-28 130.2 105 60.0
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 2.5e-28 130.2 105 60.0
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 9.3e-28 128.3 104 56.7
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.3e-26 123.6 104 56.7
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.5e-25 120.9 103 56.3
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.5e-25 120.2 147 42.2
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 6.3e-24 115.5 177 39.5
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 8.2e-24 115.2 96 54.2
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-23 114.4 363 26.7
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.7e-21 107.5 350 25.7
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 6.5e-21 105.5 102 51.0
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 8.5e-21 105.1 102 50.0
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.2e-20 103.2 144 38.9
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 9.3e-20 101.7 99 51.5
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-19 101.3 144 38.9
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 2.1e-19 100.5 91 51.6
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 2.1e-19 100.5 85 57.6
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 7.9e-19 98.6 160 36.9
Lalb_Chr00c21g0405611 Lupinus albus HOM05D004909 ORTHO05D009316 1.4e-18 97.8 115 44.3
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.4e-18 97.8 79 59.5
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.3e-18 97.1 85 56.5
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 8.8e-18 95.1 144 39.6
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 4.3e-17 92.8 144 38.9
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 4.3e-17 92.8 144 38.9
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 4.3e-17 92.8 144 35.4
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 2.8e-16 90.1 70 58.6
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.8e-15 87.4 70 57.1
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.0e-14 84.0 76 52.6
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 1.0e-13 81.6 68 57.4
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 2.2e-13 80.5 106 44.3
SGA_v2.0_scaffold328G48796 Striga asiatica HOM05D004909 ORTHO05D009316 4.2e-12 76.3 47 68.1
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 4.7e-11 72.8 54 59.3
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 6.7e-10 68.9 62 50.0
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 6.7e-10 68.9 62 50.0
CAN.G26.10 Capsicum annuum HOM05D004909 ORTHO05D009316 6.7e-10 68.9 82 40.2
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 1.1e-09 68.2 78 42.3
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 1.5e-09 67.8 85 40.0
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.8e-07 60.8 51 52.9


User provided reference genes

Program Settings