Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g013220.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.7e-70 268.1 133 100.0
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 3.7e-46 188.3 110 88.2
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 5.0e-43 177.9 110 84.5
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 3.9e-40 168.3 110 80.0
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 1.1e-39 166.8 110 80.0
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.1e-39 166.8 110 80.0
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 1.1e-39 166.8 110 80.0
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 1.1e-39 166.8 110 80.0
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.1e-39 166.8 110 80.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 1.1e-39 166.8 110 80.0
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 2.6e-39 165.6 110 79.1
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 3.3e-39 165.2 110 79.1
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 1.3e-38 163.3 110 79.1
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 77.3
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 79.1
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.7e-38 162.9 110 78.2
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 3.7e-38 161.8 110 77.3
Lsat_1_v5_gn_4_121001 Lactuca sativa HOM05D001560 ORTHO05D003613 3.7e-38 161.8 110 77.3
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 4.8e-38 161.4 110 77.3
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 1.1e-37 160.2 110 76.4
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 2.4e-37 159.1 110 75.5
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 4.1e-37 158.3 110 76.4
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 7.0e-37 157.5 110 76.4
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.2e-36 156.8 112 76.8
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 1.6e-36 156.4 129 65.9
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.6e-36 155.6 112 75.9
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 2.6e-36 155.6 112 75.9
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 2.6e-36 155.6 126 69.8
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 3.5e-36 155.2 129 65.1
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.0e-35 153.7 126 69.0
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.7e-35 152.9 110 73.6
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 2.2e-35 152.5 111 75.7
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 2.2e-35 152.5 111 75.7
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 2.2e-35 152.5 111 75.7
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 2.2e-35 152.5 111 75.7
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 2.2e-35 152.5 111 75.7
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 2.9e-35 152.1 112 75.9
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 2.9e-35 152.1 112 75.9
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 8.5e-35 150.6 110 73.6
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 8.5e-35 150.6 110 73.6
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 8.5e-35 150.6 110 73.6
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 8.5e-35 150.6 110 73.6
Peaxi162Scf00931g00038 Petunia axillaris HOM05D001560 ORTHO05D003613 1.1e-34 150.2 125 68.0
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 5.5e-34 147.9 110 74.5
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 5.5e-34 147.9 110 74.5
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 7.2e-34 147.5 110 70.0
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 9.4e-34 147.1 100 78.0
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 1.5e-31 139.8 100 73.0
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 3.4e-31 138.7 137 60.6
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.4e-31 138.7 90 81.1
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 8.3e-30 134.0 126 63.5
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 1.4e-29 133.3 102 74.5
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 7.0e-29 131.0 126 62.7
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 1.6e-28 129.8 110 66.4
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-28 129.4 110 67.3
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-28 129.4 110 69.1
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-28 129.4 110 68.2
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-28 128.6 110 68.2
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-27 127.1 126 59.5
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-27 125.6 110 63.6
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 3.8e-27 125.2 110 65.5
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 5.0e-27 124.8 110 66.4
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-27 124.8 126 59.5
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 6.5e-27 124.4 110 65.5
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-26 123.6 126 58.7
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.4e-24 116.7 97 66.0
BolSC28t60405H Brassica oleracea HOM05D001560 ORTHO05D003613 3.1e-21 105.5 70 78.6
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 3.1e-21 105.5 70 78.6
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 5.4e-21 104.8 110 58.2
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 1.6e-20 103.2 71 77.5
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-20 101.3 110 56.4
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 6.6e-19 97.8 92 63.0
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.5e-18 95.9 110 53.6
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.5e-18 94.7 64 78.1
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 2.8e-14 82.4 48 85.4
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 5.4e-13 78.2 110 49.1
Nitab4.5_0002739g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 7.0e-13 77.8 51 78.4
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 9.2e-13 77.4 51 78.4
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-12 76.6 56 71.4
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 7.8e-12 74.3 51 78.4
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.7e-11 73.2 48 79.2
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 8.6e-11 70.9 65 66.2
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 1.5e-10 70.1 65 66.2
Oeu048658.1 Olea europaea HOM05D001560 ORTHO05D003613 4.7e-09 65.1 42 78.6
Nitab4.5_0000172g0630 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.8e-08 63.2 45 68.9
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 4.4e-07 58.5 114 42.1
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.3e-06 57.0 110 38.2
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-06 56.6 69 55.1
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 2.9e-06 55.8 110 40.0
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 6.4e-06 54.7 111 39.6


User provided reference genes

Program Settings