Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 6.3e-51 203.8 99 100.0
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 7.0e-50 200.3 99 98.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.9e-48 194.9 99 94.9
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.6e-46 189.1 99 90.9
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.4e-42 176.0 99 84.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.2e-41 172.9 99 86.9
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 2.0e-33 145.6 97 70.1
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 3.5e-33 144.8 111 66.7
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 4.5e-33 144.4 92 76.1
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 5.9e-33 144.1 118 63.6
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.7e-32 142.5 101 71.3
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 2.3e-32 142.1 77 84.4
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 3.8e-32 141.4 80 86.2
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 3.8e-32 141.4 81 80.2
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 8.6e-32 140.2 116 65.5
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 8.6e-32 140.2 76 84.2
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.1e-31 139.8 78 83.3
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.9e-31 139.0 99 67.7
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 1.9e-31 139.0 109 67.9
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 2.5e-31 138.7 98 69.4
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 2.5e-31 138.7 109 67.0
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 4.3e-31 137.9 78 83.3
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 5.6e-31 137.5 76 84.2
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 7.3e-31 137.1 103 69.9
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 7.3e-31 137.1 82 81.7
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 9.5e-31 136.7 78 83.3
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 9.5e-31 136.7 99 68.7
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 9.5e-31 136.7 78 83.3
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.2e-30 136.3 93 71.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 1.6e-30 136.0 107 65.4
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.6e-30 136.0 87 75.9
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 2.1e-30 135.6 92 75.0
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 2.1e-30 135.6 97 67.0
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.1e-30 135.6 98 71.4
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 2.8e-30 135.2 94 71.3
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 2.8e-30 135.2 74 83.8
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 2.8e-30 135.2 76 81.6
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.6e-30 134.8 109 62.4
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 4.7e-30 134.4 109 63.3
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 4.7e-30 134.4 81 77.8
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 6.1e-30 134.0 101 67.3
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 8.0e-30 133.7 94 70.2
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 8.0e-30 133.7 109 62.4
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.0e-29 133.3 91 68.1
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.0e-29 133.3 117 60.7
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.0e-29 133.3 88 73.9
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 1.0e-29 133.3 88 73.9
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 1.0e-29 133.3 78 78.2
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.4e-29 132.9 79 77.2
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.4e-29 132.9 79 77.2
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.8e-29 132.5 79 78.5
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.8e-29 132.5 101 67.3
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.3e-29 132.1 101 66.3
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.3e-29 132.1 79 75.9
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.3e-29 132.1 79 75.9
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 2.3e-29 132.1 100 62.0
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 2.3e-29 132.1 96 66.7
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 5.2e-29 131.0 79 74.7
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 6.8e-29 130.6 71 84.5
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.2e-28 129.8 87 73.6
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.2e-28 129.8 76 80.3
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 1.5e-28 129.4 86 74.4
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.5e-28 129.4 97 70.1
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 2.0e-28 129.0 107 63.6
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 2.0e-28 129.0 76 78.9
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 5.7e-28 127.5 99 66.7
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 7.5e-28 127.1 74 81.1
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 7.5e-28 127.1 83 72.3
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.3e-27 126.3 80 75.0
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 1.3e-27 126.3 80 75.0
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 1.3e-27 126.3 77 77.9
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 1.7e-27 125.9 109 61.5
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 2.2e-27 125.6 78 78.2
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 3.7e-27 124.8 82 73.2
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 3.7e-27 124.8 107 63.6
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 4.9e-27 124.4 74 77.0
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 6.4e-27 124.0 77 74.0
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 6.4e-27 124.0 78 76.9
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 8.3e-27 123.6 80 72.5
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 8.3e-27 123.6 80 72.5
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 8.3e-27 123.6 80 72.5
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 72.5
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 72.5
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 72.5
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.1e-26 123.2 79 74.7
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 1.1e-26 123.2 80 71.2
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.8e-26 122.5 74 78.4
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 3.2e-26 121.7 63 87.3
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 3.2e-26 121.7 81 70.4
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 5.4e-26 120.9 78 73.1
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 5.4e-26 120.9 107 61.7
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 9.2e-26 120.2 67 76.1
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.6e-25 119.4 68 75.0
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.6e-25 119.4 95 67.4
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 2.0e-25 119.0 79 69.6
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 3.5e-25 118.2 80 70.0
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 3.5e-25 118.2 114 54.4
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 5.9e-25 117.5 62 83.9
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 5.9e-25 117.5 91 64.8
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 3.9e-24 114.8 62 82.3
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.2e-22 109.8 74 73.0
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 2.1e-22 109.0 65 73.8
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 1.8e-21 105.9 85 60.0
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 6.6e-16 87.4 53 77.4
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 6.2e-14 80.9 63 55.6
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 8.9e-13 77.0 97 48.5
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 8.3e-11 70.5 94 50.0
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 1.2e-09 66.6 55 65.5
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 4.6e-09 64.7 40 75.0
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 6.6e-08 60.8 45 64.4
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 5.6e-07 57.8 74 48.6


User provided reference genes

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