Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g094000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 2.3e-22 109.4 142 100.0
PGSC0003DMG400020261 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.3e-22 109.4 142 98.6
Sopen02g038650 Solanum pennellii HOM05D000135 ORTHO05D000816 2.6e-21 105.9 142 63.4
CAN.G473.85 Capsicum annuum HOM05D000135 ORTHO05D000816 6.3e-20 101.3 50 94.0
Nitab4.5_0007150g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.4e-19 98.2 50 94.0
Nitab4.5_0002887g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.0e-17 94.0 50 92.0
Peaxi162Scf00420g00047 Petunia axillaris HOM05D000135 ORTHO05D000816 2.8e-15 85.9 50 78.0
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 1.3e-12 77.0 47 78.7
Ca_28119_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 3.3e-08 62.4 47 59.6
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.2e-07 60.5 48 56.2
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 1.2e-07 60.5 48 56.2
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 2.1e-07 59.7 46 56.5
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 2.1e-07 59.7 47 59.6
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 2.1e-07 59.7 47 59.6
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 2.8e-07 59.3 47 59.6
PGSC0003DMG400013427 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.8e-07 59.3 42 69.0
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 3.6e-07 58.9 51 60.8
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 6.1e-07 58.2 47 57.4
Atru.chr13.16 Acer truncatum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 43 58.1
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 48 54.2
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 1.0e-06 57.4 47 57.4
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 1.4e-06 57.0 48 54.2
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 54.2
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 56.2
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 56.2
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 58.3
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 2.3e-06 56.2 49 55.1
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 49 57.1
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 3.0e-06 55.8 49 55.1
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.0e-06 55.8 49 55.1
Glyma.19G088200 Glycine max HOM05D000135 ORTHO05D000816 3.0e-06 55.8 47 55.3
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 3.0e-06 55.8 47 51.1
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 3.0e-06 55.8 47 55.3
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 3.0e-06 55.8 47 55.3
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 58.3
vmacro05943 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 4.0e-06 55.5 46 56.5
VMungo1383G0529 Vigna mungo HOM05D000135 ORTHO05D000816 4.0e-06 55.5 47 53.2
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 54.2
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 52.1
Ciclev10018267m.g Citrus clementina HOM05D000135 ORTHO05D000816 6.8e-06 54.7 46 54.3
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 6.8e-06 54.7 47 57.4
Sopen03g001050 Solanum pennellii HOM05D000135 ORTHO05D000816 6.8e-06 54.7 43 67.4
vmacro05944 Vaccinium macrocarpon HOM05D000135 ORTHO05D000816 6.8e-06 54.7 43 60.5
DCAR_015089 Daucus carota HOM05D000135 ORTHO05D000816 8.9e-06 54.3 48 54.2
Dinv33354 Davidia involucrata HOM05D000135 ORTHO05D000816 8.9e-06 54.3 47 55.3
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 8.9e-06 54.3 47 53.2


User provided reference genes

Program Settings