Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 5.9e-63 244.2 138 100.0
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 3.1e-56 221.9 141 92.2
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 2.0e-47 192.6 151 71.5
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 8.0e-36 154.1 141 61.7
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 2.3e-19 99.4 116 45.7
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 3.1e-19 99.0 103 48.5
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 2.4e-16 89.4 110 44.5
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 2.7e-15 85.9 103 42.7
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 3.5e-15 85.5 103 42.7
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 6.0e-15 84.7 136 37.5
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 6.0e-15 84.7 107 45.8
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 3.9e-14 82.0 100 44.0
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 3.9e-14 82.0 99 43.4
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 2.5e-13 79.3 122 37.7
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.5e-13 79.3 117 39.3
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 3.3e-13 79.0 106 44.3
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.3e-13 78.6 106 40.6
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 5.6e-13 78.2 113 49.6
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 5.6e-13 78.2 125 36.0
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 9.5e-13 77.4 122 39.3
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.2e-12 77.0 131 36.6
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.1e-11 73.9 110 38.2
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 1.1e-11 73.9 112 38.4
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 6.8e-11 71.2 103 43.7
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 8.9e-11 70.9 128 37.5
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.2e-10 70.5 107 36.4
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.0e-10 69.7 107 35.5
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 2.0e-10 69.7 131 35.1
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 5.8e-10 68.2 107 38.3
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 7.5e-10 67.8 114 39.5
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 9.8e-10 67.4 104 37.5
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 1.3e-09 67.0 106 38.7
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 2.2e-09 66.2 116 35.3
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 2.2e-09 66.2 109 36.7
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.2e-09 66.2 115 38.3
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 2.2e-09 66.2 127 33.1
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 2.9e-09 65.9 129 32.6
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 2.9e-09 65.9 109 36.7
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 3.7e-09 65.5 105 38.1
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 4.9e-09 65.1 116 37.9
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 4.9e-09 65.1 115 37.4
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 1.1e-08 63.9 106 41.5
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 1.1e-08 63.9 107 33.6
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 1.1e-08 63.9 107 49.5
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.1e-08 63.9 109 36.7
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 1.1e-08 63.9 99 43.4
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.9e-08 63.2 105 35.2
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 3.2e-08 62.4 116 35.3
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 3.2e-08 62.4 106 34.0
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 4.1e-08 62.0 106 35.8
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 5.4e-08 61.6 90 41.1
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 5.4e-08 61.6 80 42.5
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 5.4e-08 61.6 104 39.4
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 7.1e-08 61.2 105 37.1
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 7.1e-08 61.2 84 42.9
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 7.1e-08 61.2 114 32.5
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 7.1e-08 61.2 114 32.5
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 9.2e-08 60.8 89 40.4
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 9.2e-08 60.8 107 34.6
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 9.2e-08 60.8 107 34.6
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 1.6e-07 60.1 122 31.1
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 1.6e-07 60.1 108 33.3
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 2.1e-07 59.7 82 39.0
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 4.6e-07 58.5 109 33.9
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 4.6e-07 58.5 109 33.9
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 4.6e-07 58.5 90 38.9
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 6.0e-07 58.2 127 34.6
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 7.8e-07 57.8 120 36.7
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 1.0e-06 57.4 112 33.9
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 1.0e-06 57.4 104 34.6
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 1.3e-06 57.0 104 35.6
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 1.3e-06 57.0 104 35.6
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 1.3e-06 57.0 111 33.3
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 3.0e-06 55.8 116 32.8
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 3.0e-06 55.8 71 43.7
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 5.1e-06 55.1 163 30.1
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 6.6e-06 54.7 103 36.9
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 6.6e-06 54.7 116 31.9
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 8.6e-06 54.3 107 30.8


User provided reference genes

Program Settings