Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 4.4e-92 341.3 171 100.0
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.7e-89 332.0 171 97.7
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 4.0e-85 318.2 171 93.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.4e-37 160.2 170 53.5
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 4.9e-35 151.8 178 49.4
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.1e-34 150.6 176 47.2
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 2.4e-34 149.4 184 47.3
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 7.8e-33 144.4 175 45.1
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 2.3e-32 142.9 180 44.4
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 5.1e-32 141.7 188 45.7
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.1e-31 140.6 180 48.9
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.5e-31 140.2 190 44.7
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 7.3e-31 137.9 191 45.5
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 7.3e-31 137.9 180 48.3
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 7.3e-31 137.9 172 45.3
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 9.6e-31 137.5 184 45.1
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 9.6e-31 137.5 180 45.0
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.8e-30 136.0 181 43.6
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 4.8e-30 135.2 161 47.8
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.8e-29 133.3 172 43.6
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.3e-29 131.7 174 46.0
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 9.0e-29 131.0 166 47.6
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.2e-28 130.6 177 44.1
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 4.5e-28 128.6 181 41.4
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 9.9e-28 127.5 173 43.4
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.7e-27 126.7 175 44.0
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 2.2e-27 126.3 182 40.1
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 2.2e-27 126.3 175 43.4
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.9e-27 125.9 175 42.3
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 4.9e-27 125.2 179 44.1
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 4.9e-27 125.2 181 41.4
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 4.9e-27 125.2 182 39.6
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 8.4e-27 124.4 179 40.8
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 8.4e-27 124.4 182 44.0
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 1.4e-26 123.6 175 45.1
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 2.4e-26 122.9 176 44.3
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 3.2e-26 122.5 175 45.1
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.2e-26 122.1 177 41.8
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 4.2e-26 122.1 172 44.2
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 7.1e-26 121.3 187 42.8
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 9.3e-26 120.9 161 43.5
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 1.6e-25 120.2 188 41.0
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 2.1e-25 119.8 182 38.5
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.7e-25 119.4 176 40.3
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 7.9e-25 117.9 178 41.6
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.0e-24 117.5 185 42.2
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.0e-24 117.5 183 39.3
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.3e-24 117.1 186 38.2
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.8e-24 116.7 185 41.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.8e-24 116.7 181 38.7
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 3.0e-24 115.9 166 44.6
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.0e-24 115.9 181 38.1
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 3.0e-24 115.9 187 39.0
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.9e-24 115.5 172 40.7
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 6.7e-24 114.8 168 44.0
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 8.7e-24 114.4 185 42.2
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.1e-23 114.0 198 39.4
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 1.1e-23 114.0 178 38.2
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 1.5e-23 113.6 170 40.6
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 1.9e-23 113.2 168 41.7
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.9e-23 113.2 171 41.5
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 3.3e-23 112.5 173 42.2
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 3.3e-23 112.5 180 38.3
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 4.3e-23 112.1 175 38.3
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 5.6e-23 111.7 179 39.1
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 9.6e-23 110.9 174 37.9
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 9.6e-23 110.9 173 41.6
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 1.6e-22 110.2 174 37.9
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.1e-22 109.8 175 40.0
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 2.8e-22 109.4 161 41.6
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.7e-22 109.0 176 38.6
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 4.8e-22 108.6 182 37.9
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 6.2e-22 108.2 159 40.3
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 6.2e-22 108.2 171 37.4
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 6.2e-22 108.2 171 37.4
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 6.2e-22 108.2 171 41.5
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.4e-21 107.1 161 41.0
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.8e-21 106.7 182 39.6
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.8e-21 106.7 186 36.0
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 3.1e-21 105.9 168 43.5
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 3.1e-21 105.9 175 39.4
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 3.1e-21 105.9 183 36.1
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 4.0e-21 105.5 179 35.8
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 5.3e-21 105.1 192 32.8
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.3e-21 105.1 182 39.0
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 6.9e-21 104.8 182 39.0
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-20 104.0 180 36.1
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.2e-20 104.0 180 38.3
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 2.0e-20 103.2 180 35.6
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 3.4e-20 102.4 193 33.7
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 5.8e-20 101.7 195 34.9
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 5.8e-20 101.7 176 37.5
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 7.6e-20 101.3 178 34.3
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 7.6e-20 101.3 178 34.3
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 7.6e-20 101.3 175 33.1
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 2.2e-19 99.8 179 37.4
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.2e-19 99.8 179 37.4
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.9e-19 99.4 184 36.4
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 3.8e-19 99.0 183 36.6
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 8.4e-19 97.8 188 37.2
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.2e-18 95.9 183 35.0
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 5.5e-18 95.1 166 37.3
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 4.6e-17 92.0 135 40.7
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 7.9e-17 91.3 176 35.8
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 7.9e-17 91.3 160 35.6
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.0e-16 90.9 165 38.8
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.8e-16 90.1 217 33.2
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.3e-16 89.7 167 38.3
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 3.0e-16 89.4 174 32.8
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 3.9e-16 89.0 176 34.7
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 5.1e-16 88.6 160 34.4
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 1.1e-15 87.4 182 33.5
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.5e-15 87.0 210 31.9
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 2.5e-15 86.3 176 36.9
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.5e-15 86.3 180 33.9
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 4.3e-15 85.5 154 36.4
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.3e-14 84.0 205 32.2
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 3.7e-14 82.4 177 33.3
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.4e-13 79.7 182 33.5
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 5.3e-13 78.6 130 40.8
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 9.0e-13 77.8 115 40.0
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.3e-11 73.9 79 45.6
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 1.7e-11 73.6 164 28.7
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 8.4e-11 71.2 148 37.2
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.2e-10 69.3 155 35.5
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.5e-10 68.6 49 67.3
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 2.1e-09 66.6 193 29.0
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 3.5e-09 65.9 78 43.6
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.8e-08 63.5 55 60.0
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.3e-07 58.9 48 58.3
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 7.4e-07 58.2 95 40.0
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 4.8e-06 55.5 86 37.2


User provided reference genes

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