Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.1e-58 228.8 113 100.0
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 3.6e-58 228.0 113 99.1
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 7.9e-58 226.9 113 99.1
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 5.7e-56 220.7 113 95.6
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 9.7e-56 219.9 113 94.7
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.4e-54 216.1 113 93.8
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.8e-54 215.7 113 92.0
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 6.5e-44 180.6 113 77.0
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 9.4e-43 176.8 97 88.7
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 1.2e-42 176.4 115 79.1
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.2e-42 176.4 114 78.9
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 3.6e-42 174.9 114 76.3
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 3.6e-42 174.9 115 77.4
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 6.1e-42 174.1 117 76.9
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 6.1e-42 174.1 114 78.9
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 8.0e-42 173.7 115 75.7
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.0e-41 173.3 114 75.4
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.4e-41 172.9 112 77.7
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.8e-41 172.6 113 76.1
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.8e-41 172.6 113 77.0
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 2.3e-41 172.2 113 74.3
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 2.3e-41 172.2 113 77.9
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 4.0e-41 171.4 102 82.4
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 4.0e-41 171.4 116 75.9
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.2e-41 171.0 114 76.3
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 6.8e-41 170.6 108 76.9
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.2e-40 169.9 114 74.6
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.2e-40 169.9 114 74.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.5e-40 169.5 114 75.4
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.4e-40 168.3 123 74.8
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.4e-40 168.3 123 74.8
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 3.4e-40 168.3 114 72.8
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 4.4e-40 167.9 114 75.4
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 5.7e-40 167.5 97 85.6
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.7e-39 166.0 101 78.2
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 2.8e-39 165.2 99 82.8
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 2.8e-39 165.2 99 82.8
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 4.8e-39 164.5 110 73.6
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 4.8e-39 164.5 99 79.8
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 4.8e-39 164.5 114 73.7
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 4.8e-39 164.5 113 71.7
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 4.8e-39 164.5 103 80.6
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 6.3e-39 164.1 97 80.4
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 8.3e-39 163.7 103 78.6
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 1.1e-38 163.3 112 69.6
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.4e-38 162.9 96 79.2
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.4e-38 162.9 97 79.4
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.8e-38 162.5 102 80.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.4e-38 162.2 102 79.4
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.1e-38 161.8 116 68.1
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 4.1e-38 161.4 105 73.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 4.1e-38 161.4 97 80.4
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.1e-38 161.4 97 80.4
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.1e-38 161.4 97 80.4
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.1e-38 161.4 97 80.4
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 5.4e-38 161.0 114 74.6
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 7.0e-38 160.6 116 67.2
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 7.0e-38 160.6 114 71.1
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 7.0e-38 160.6 119 64.7
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 9.1e-38 160.2 97 79.4
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 1.2e-37 159.8 99 78.8
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.2e-37 159.8 115 68.7
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 1.6e-37 159.5 99 75.8
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 1.6e-37 159.5 114 71.1
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 2.7e-37 158.7 115 74.8
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-37 158.7 97 79.4
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 2.7e-37 158.7 99 77.8
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 3.5e-37 158.3 102 72.5
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 3.5e-37 158.3 104 75.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 5.9e-37 157.5 100 73.0
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 7.7e-37 157.1 102 71.6
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 7.7e-37 157.1 102 71.6
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 7.7e-37 157.1 102 71.6
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 7.7e-37 157.1 102 71.6
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 7.7e-37 157.1 111 67.6
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.3e-36 156.4 99 75.8
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.7e-36 156.0 91 80.2
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.9e-36 155.2 100 75.0
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 8.5e-36 153.7 113 71.7
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.1e-35 153.3 80 88.8
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 5.5e-35 151.0 113 68.1
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 5.5e-35 151.0 106 72.6
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 7.2e-35 150.6 122 63.9
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.8e-34 148.7 81 86.4
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-33 146.4 98 75.5
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.6e-32 142.1 109 63.3
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.4e-30 136.3 97 68.0
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 5.6e-27 124.4 83 77.1
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 9.5e-27 123.6 94 71.3
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.1e-26 122.5 95 58.9
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.6e-26 121.7 93 64.5
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 1.4e-25 119.8 100 56.0
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 3.4e-24 115.2 94 54.3
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 3.7e-23 111.7 64 84.4
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.8e-22 109.4 93 57.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 2.7e-21 105.5 60 83.3
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 1.7e-20 102.8 87 52.9
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 7.5e-16 87.4 84 45.2
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 4.7e-10 68.2 93 33.3


User provided reference genes

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