Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 6.1e-177 624.0 307 100.0
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.5e-175 618.6 307 99.0
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 2.8e-174 615.1 307 98.0
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 5.9e-172 607.4 307 96.7
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.4e-165 586.3 307 92.8
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 6.3e-150 534.3 307 81.8
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 7.0e-149 530.8 307 81.4
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 81.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 81.1
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 2.3e-144 515.8 307 79.2
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 77.5
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 79.2
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 3.4e-143 511.9 307 78.5
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 78.8
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 79.2
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 77.9
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.3e-142 510.0 307 78.2
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.7e-142 509.6 307 78.5
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 78.8
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 79.2
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 78.2
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 8.3e-142 507.3 307 78.2
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 8.3e-142 507.3 307 78.2
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 77.5
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 3.1e-141 505.4 307 77.5
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.0e-141 504.2 307 77.5
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 7.0e-141 504.2 307 76.9
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 7.0e-141 504.2 307 77.5
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 9.2e-141 503.8 307 78.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 9.2e-141 503.8 307 77.2
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.2e-141 503.8 278 89.2
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.2e-140 503.4 307 76.9
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.5e-140 501.9 307 77.2
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 77.2
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 77.2
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.0e-139 500.4 307 76.5
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.9e-139 498.8 358 69.3
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 76.9
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 75.9
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 8.6e-139 497.3 371 66.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.5e-138 496.5 277 88.1
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.3e-138 495.4 307 76.2
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 7.3e-138 494.2 304 76.0
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.2e-137 493.4 307 75.6
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 3.6e-137 491.9 307 75.6
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 76.5
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 1.0e-136 490.3 307 76.2
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.0e-136 490.3 307 75.6
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.8e-136 489.6 307 76.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.0e-136 488.8 307 75.2
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 5.2e-136 488.0 307 75.2
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 8.9e-136 487.3 307 75.9
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.0e-135 486.1 307 73.6
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 2.6e-135 485.7 307 75.2
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 3.7e-134 481.9 307 75.6
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.9e-134 481.5 323 72.1
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 4.9e-134 481.5 307 74.9
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 6.4e-134 481.1 307 74.6
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.4e-133 479.9 307 75.2
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.8e-133 479.6 288 78.1
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 3.2e-133 478.8 307 75.2
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.2e-133 478.8 306 72.5
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 5.4e-133 478.0 307 74.3
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.7e-132 475.7 307 72.6
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 4.6e-132 474.9 391 62.1
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 4.6e-132 474.9 307 71.7
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 5.9e-132 474.6 307 73.3
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 5.9e-132 474.6 306 71.9
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 3.9e-131 471.9 307 73.6
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.2e-129 466.8 370 63.2
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.1e-129 466.1 307 70.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 4.7e-129 464.9 307 72.6
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 6.2e-129 464.5 277 80.5
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.0e-128 463.8 307 69.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 2.3e-120 436.0 307 70.7
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.2e-118 429.5 277 73.6
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.7e-118 428.7 306 69.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.4e-117 426.8 276 73.6
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 9.2e-117 424.1 293 71.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 1.6e-116 423.3 314 68.2
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.7e-110 403.3 312 61.2
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 6.4e-110 401.4 243 78.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.9e-109 399.8 235 80.4
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.7e-107 393.3 310 60.6
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 8.1e-105 384.4 307 62.5
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.5e-103 380.2 306 57.8
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.6e-100 370.2 297 59.6
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.3e-99 367.1 236 73.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.9e-78 296.2 315 48.6
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.9e-74 283.5 245 59.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.1e-73 280.0 190 67.4
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 3.9e-59 232.6 310 42.3
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 9.7e-58 228.0 148 75.0
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.2e-57 226.9 567 29.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.6e-55 219.9 170 69.4
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 7.7e-55 218.4 282 41.8
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 7.7e-55 218.4 131 75.6
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.5e-23 113.2 223 32.3
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.1e-21 108.2 96 49.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 9.5e-21 105.1 71 66.2
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.7e-20 102.8 88 60.2
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.3e-14 84.7 72 56.9
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 3.5e-07 60.1 39 76.9


User provided reference genes

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