Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 4.1e-159 564.7 287 100.0
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 3.6e-155 551.6 283 98.2
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 1.8e-154 549.3 283 97.9
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 6.3e-144 514.2 283 90.5
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 9.8e-137 490.3 283 87.3
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 2.3e-130 469.2 276 85.9
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 2.0e-121 439.5 272 82.4
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 1.3e-120 436.8 283 75.6
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 4.9e-120 434.9 283 75.3
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 1.6e-118 429.9 283 73.1
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 4.6e-118 428.3 283 73.9
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 4.6e-118 428.3 283 71.4
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 5.1e-117 424.9 295 70.5
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 8.6e-117 424.1 283 74.2
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 3.3e-116 422.2 283 73.1
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 1.8e-114 416.4 283 72.1
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 2.3e-114 416.0 282 70.9
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 2.0e-113 412.9 283 70.7
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 4.4e-113 411.8 283 69.6
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.3e-112 410.2 283 71.4
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 3.7e-112 408.7 283 70.3
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 4.9e-112 408.3 284 71.1
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 8.3e-112 407.5 285 70.2
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 1.1e-111 407.1 283 70.3
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 1.9e-111 406.4 283 69.3
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 2.4e-111 406.0 283 70.0
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 2.4e-111 406.0 283 70.0
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 9.2e-111 404.1 283 68.9
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 1.6e-110 403.3 283 69.6
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 2.1e-110 402.9 283 68.9
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 2.7e-110 402.5 283 68.6
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.7e-110 402.5 283 68.6
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 2.7e-110 402.5 283 67.5
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 4.6e-110 401.7 283 70.0
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 4.6e-110 401.7 283 69.3
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.3e-109 400.2 283 67.1
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 1.3e-109 400.2 272 71.3
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 3.9e-109 398.7 283 68.2
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 5.1e-109 398.3 283 67.1
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 6.6e-109 397.9 283 68.9
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 8.6e-109 397.5 285 67.7
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.9e-108 396.4 284 68.3
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.5e-108 396.0 283 68.6
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.5e-108 396.0 283 67.5
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 4.3e-108 395.2 283 67.5
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 4.3e-108 395.2 283 67.8
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 7.3e-108 394.4 283 68.2
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 7.3e-108 394.4 283 67.1
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 2.4e-106 389.4 283 66.8
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.5e-105 386.7 283 66.4
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 2.0e-105 386.3 272 68.4
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 2.0e-105 386.3 283 67.5
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 2.6e-105 386.0 283 65.0
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.3e-104 383.6 285 66.3
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 1.7e-104 383.3 309 63.4
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 1.7e-104 383.3 286 65.7
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 2.2e-104 382.9 283 65.7
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 2.9e-104 382.5 286 65.4
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 3.8e-104 382.1 308 63.3
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 4.9e-104 381.7 283 65.4
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 6.4e-104 381.3 284 64.8
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 1.1e-103 380.6 286 65.4
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.1e-103 380.6 283 66.1
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 1.4e-103 380.2 284 65.1
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 1.9e-103 379.8 286 66.1
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 1.9e-103 379.8 277 67.1
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 2.4e-103 379.4 296 64.9
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 4.2e-103 378.6 284 64.8
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.4e-103 378.3 283 65.7
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 7.1e-103 377.9 283 64.3
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 9.2e-103 377.5 272 67.3
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 1.6e-102 376.7 283 65.0
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 3.5e-102 375.6 284 64.1
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 4.6e-102 375.2 272 66.5
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 6.0e-102 374.8 284 67.3
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 7.8e-102 374.4 286 65.0
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 1.3e-101 373.6 283 63.3
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 8.7e-101 370.9 283 64.7
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 3.3e-100 369.0 286 64.7
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 4.3e-100 368.6 272 64.7
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 1.6e-99 366.7 340 57.6
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 1.1e-98 364.0 273 64.8
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 1.1e-98 364.0 334 58.7
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 3.4e-97 359.0 283 60.8
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 3.4e-97 359.0 284 62.3
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 7.6e-97 357.8 251 69.7
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 2.2e-96 356.3 327 56.6
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 2.9e-96 355.9 288 63.2
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 1.1e-95 354.0 284 60.9
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 4.3e-92 342.0 263 67.3
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 3.4e-89 332.4 299 58.5
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 8.7e-77 291.2 294 51.4
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 1.6e-75 287.0 205 69.3
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 1.8e-74 283.5 290 52.8
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 5.3e-74 282.0 220 62.3
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 7.1e-71 271.6 298 46.3
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 2.8e-67 259.6 193 68.4
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 4.8e-67 258.8 292 48.3
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.1e-62 243.4 183 67.2
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 6.9e-58 228.4 183 60.7
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 2.0e-57 226.9 374 35.3
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 6.5e-56 221.9 304 38.8
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.6e-46 190.7 142 66.9
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 7.0e-42 175.3 309 37.2
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 6.5e-40 168.7 127 66.1
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 1.6e-38 164.1 127 64.6
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 1.4e-37 161.0 130 65.4
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 5.3e-34 149.1 396 26.8
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 2.1e-30 137.1 104 59.6
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 5.2e-29 132.5 171 44.4
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 4.4e-28 129.4 80 72.5
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 1.3e-24 117.9 79 67.1
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-21 107.1 111 47.7
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 9.8e-20 101.7 191 37.2
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 5.4e-18 95.9 67 61.2
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 6.6e-16 89.0 60 70.0
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 8.6e-16 88.6 71 59.2
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 7.3e-15 85.5 53 77.4
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 9.5e-15 85.1 59 71.2
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 2.8e-14 83.6 126 40.5
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 2.3e-08 63.9 35 85.7
AL2G24330 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 1.6e-06 57.8 34 76.5


User provided reference genes

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