Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g090700.2 Solanum lycopersicum HOM05D001349 ORTHO05D008727 5.9e-29 130.2 66 100.0
Sopen02g035330 Solanum pennellii HOM05D001349 ORTHO05D008727 7.7e-29 129.8 65 100.0
PGSC0003DMG400015779 Solanum tuberosum HOM05D001349 ORTHO05D008727 6.5e-28 126.7 65 96.9
CAN.G836.74 Capsicum annuum HOM05D001349 ORTHO05D008727 1.2e-26 122.5 65 90.8
Nitab4.5_0000310g0030 Nicotiana tabacum HOM05D001349 ORTHO05D008727 4.4e-24 114.0 65 83.1
Nitab4.5_0001034g0110 Nicotiana tabacum HOM05D001349 ORTHO05D008727 1.7e-23 112.1 65 83.1
Peaxi162Scf00450g00714 Petunia axillaris HOM05D001349 ORTHO05D008727 1.8e-22 108.6 58 87.9
Nn1g05820 Nelumbo nucifera HOM05D001349 ORTHO05D008727 8.6e-20 99.8 65 72.3
TAR628G1094 Trochodendron aralioides HOM05D001349 ORTHO05D008727 1.9e-19 98.6 65 72.3
Nn5g30237 Nelumbo nucifera HOM05D001349 ORTHO05D008727 5.5e-19 97.1 65 70.8
CSS0012766 Camellia sinensis var. sinensis HOM05D001349 ORTHO05D008727 9.5e-19 96.3 65 76.9
CSS0022170 Camellia sinensis var. sinensis HOM05D001349 ORTHO05D008727 9.5e-19 96.3 65 76.9
CiPaw.01G019300 Carya illinoinensis HOM05D001349 ORTHO05D008727 1.6e-18 95.5 60 78.3
Atru.chr3.347 Acer truncatum HOM05D001349 ORTHO05D008727 2.1e-18 95.1 67 68.7
Dinv39864 Davidia involucrata HOM05D001349 ORTHO05D008727 2.8e-18 94.7 65 73.8
TWI09G0731 Tripterygium wilfordii HOM05D001349 ORTHO05D008727 4.7e-18 94.0 64 71.9
Manes.12G103000 Manihot esculenta HOM05D001349 ORTHO05D008727 6.1e-18 93.6 65 70.8
Gohir.A11G191200 Gossypium hirsutum HOM05D001349 ORTHO05D008727 1.0e-17 92.8 63 73.0
Lsat_1_v5_gn_4_166021 Lactuca sativa HOM05D001349 ORTHO05D008727 1.0e-17 92.8 65 70.8
Sc03g0001540 Simmondsia chinensis HOM05D001349 ORTHO05D008727 1.4e-17 92.4 65 70.8
COL.COLO4_11397 Corchorus olitorius HOM05D001349 ORTHO05D008727 1.8e-17 92.0 58 75.9
Gohir.D11G198000 Gossypium hirsutum HOM05D001349 ORTHO05D008727 1.8e-17 92.0 63 74.6
Gorai.007G211900 Gossypium raimondii HOM05D001349 ORTHO05D008727 1.8e-17 92.0 63 74.6
Rhsim08G0101400 Rhododendron simsii HOM05D001349 ORTHO05D008727 2.3e-17 91.7 65 75.4
AT4G37030 Arabidopsis thaliana HOM05D001349 ORTHO05D008727 3.0e-17 91.3 65 69.2
HanXRQChr09g0263541 Helianthus annuus HOM05D001349 ORTHO05D008727 3.0e-17 91.3 65 70.8
vmacro17946 Vaccinium macrocarpon HOM05D001349 ORTHO05D008727 3.0e-17 91.3 65 72.3
GSVIVG01022144001 Vitis vinifera HOM05D001349 ORTHO05D008727 3.0e-17 91.3 65 69.2
Ciclev10025278m.g Citrus clementina HOM05D001349 ORTHO05D008727 4.0e-17 90.9 65 69.2
Psat4g087080 Pisum sativum HOM05D001349 ORTHO05D008727 4.0e-17 90.9 61 75.4
Actinidia16501 Actinidia chinensis HOM05D001349 ORTHO05D008727 5.2e-17 90.5 65 72.3
Haze_15418 Corylus avellana HOM05D001349 ORTHO05D008727 5.2e-17 90.5 60 73.3
CANSAT01G0216 Cannabis sativa HOM05D001349 ORTHO05D008727 6.8e-17 90.1 57 80.7
Ah.02g124200 Amaranthus hybridus HOM05D001349 ORTHO05D008727 8.9e-17 89.7 65 69.2
Cfa004005 Carpinus fangiana HOM05D001349 ORTHO05D008727 8.9e-17 89.7 65 67.7
AUR62001942 Chenopodium quinoa HOM05D001349 ORTHO05D008727 8.9e-17 89.7 63 71.4
Ca_19504_v3 Cicer arietinum L. HOM05D001349 ORTHO05D008727 8.9e-17 89.7 63 71.4
EL10Ac6g15761 Beta vulgaris HOM05D001349 ORTHO05D008727 1.5e-16 89.0 70 67.1
AUR62003864 Chenopodium quinoa HOM05D001349 ORTHO05D008727 2.0e-16 88.6 62 72.6
BraA08t34209Z Brassica rapa HOM05D001349 ORTHO05D008727 2.6e-16 88.2 65 67.7
CARHR245480 Cardamine hirsuta HOM05D001349 ORTHO05D008727 2.6e-16 88.2 65 66.2
TPR.G10247 Trifolium pratense HOM05D001349 ORTHO05D008727 2.6e-16 88.2 62 69.4
Lj4A144T45 Lonicera japonica HOM05D001349 ORTHO05D008727 3.4e-16 87.8 61 72.1
QL06p041796 Quercus lobata HOM05D001349 ORTHO05D008727 3.4e-16 87.8 65 64.6
Thecc.01G054200 Theobroma cacao HOM05D001349 ORTHO05D008727 3.4e-16 87.8 58 72.4
MSTRG.23758 Avicennia marina HOM05D001349 ORTHO05D008727 4.4e-16 87.4 65 64.6
Lalb_Chr05g0226611 Lupinus albus HOM05D001349 ORTHO05D008727 5.7e-16 87.0 62 69.4
SalBow1G6036 Salvia bowleyana HOM05D001349 ORTHO05D008727 7.5e-16 86.7 65 64.6
THA.LOC104819844 Tarenaya hassleriana HOM05D001349 ORTHO05D008727 7.5e-16 86.7 65 66.2
Aa31LG6G13940 Aethionema arabicum HOM05D001349 ORTHO05D008727 9.8e-16 86.3 53 75.5
Cpa.g.sc55.166 Carica papaya HOM05D001349 ORTHO05D008727 9.8e-16 86.3 62 67.7
ECA232G1519 Erigeron canadensis HOM05D001349 ORTHO05D008727 9.8e-16 86.3 65 66.2
Migut.H00443 Erythranthe guttata HOM05D001349 ORTHO05D008727 9.8e-16 86.3 65 64.6
FvH4_1g15860 Fragaria vesca HOM05D001349 ORTHO05D008727 9.8e-16 86.3 60 71.7
FAN19G0070 Fragaria x ananassa HOM05D001349 ORTHO05D008727 9.8e-16 86.3 60 71.7
Duzib264G1102 Durio zibethinus HOM05D001349 ORTHO05D008727 1.3e-15 85.9 58 75.9
BolC3t20216H Brassica oleracea HOM05D001349 ORTHO05D008727 1.7e-15 85.5 65 64.6
Carub.0007s0323 Capsella rubella HOM05D001349 ORTHO05D008727 1.7e-15 85.5 65 64.6
PSO541G1298 Papaver somniferum HOM05D001349 ORTHO05D008727 1.7e-15 85.5 65 64.6
FAN23G1283 Fragaria x ananassa HOM05D001349 ORTHO05D008727 2.2e-15 85.1 60 70.0
FAN28G1589 Fragaria x ananassa HOM05D001349 ORTHO05D008727 2.2e-15 85.1 60 70.0
PSO675G3932 Papaver somniferum HOM05D001349 ORTHO05D008727 2.2e-15 85.1 65 64.6
RcHm_v2.0_Chr2g0105181 Rosa chinensis HOM05D001349 ORTHO05D008727 2.2e-15 85.1 56 73.2
Cc07_g05920 Coffea canephora HOM05D001349 ORTHO05D008727 2.8e-15 84.7 54 77.8
Lj4g0015461 Lotus japonicus HOM05D001349 ORTHO05D008727 2.8e-15 84.7 62 66.1
AL7G13800 Arabidopsis lyrata HOM05D001349 ORTHO05D008727 3.7e-15 84.3 63 66.7
Sabra07G0037600 Salix brachista HOM05D001349 ORTHO05D008727 3.7e-15 84.3 64 62.5
HPP92_016381 Vanilla planifolia HOM05D001349 ORTHO05D008727 3.7e-15 84.3 53 77.4
BcaB03g12357 Brassica carinata HOM05D001349 ORTHO05D008727 4.9e-15 84.0 65 64.6
Thhalv10024790m.g Eutrema salsugineum HOM05D001349 ORTHO05D008727 4.9e-15 84.0 65 64.6
Glyma.17G175600 Glycine max HOM05D001349 ORTHO05D008727 4.9e-15 84.0 63 65.1
HPP92_016729 Vanilla planifolia HOM05D001349 ORTHO05D008727 4.9e-15 84.0 56 69.6
BcaC01g00429 Brassica carinata HOM05D001349 ORTHO05D008727 6.3e-15 83.6 65 63.1
Potri.007G042400 Populus trichocarpa HOM05D001349 ORTHO05D008727 6.3e-15 83.6 64 60.9
Oeu009812.1 Olea europaea HOM05D001349 ORTHO05D008727 8.3e-15 83.2 63 73.0
DCAR_025728 Daucus carota HOM05D001349 ORTHO05D008727 1.8e-14 82.0 65 58.5
Lalb_Chr16g0378481 Lupinus albus HOM05D001349 ORTHO05D008727 1.8e-14 82.0 62 67.7
Phvul.003G244600 Phaseolus vulgaris HOM05D001349 ORTHO05D008727 2.4e-14 81.6 61 63.9
Prupe.7G134900 Prunus persica HOM05D001349 ORTHO05D008727 3.1e-14 81.3 64 67.2
Hund16332 Selenicereus undatus HOM05D001349 ORTHO05D008727 3.1e-14 81.3 63 69.8
MBI02_g17331_MAGBIO Magnolia biondii HOM05D001349 ORTHO05D008727 5.4e-14 80.5 65 61.5
MD02G1170500 Malus domestica HOM05D001349 ORTHO05D008727 5.4e-14 80.5 53 79.2
Sp7g34730 Schrenkiella parvula HOM05D001349 ORTHO05D008727 7.0e-14 80.1 65 63.1
arahy.Tifrunner.gnm1.ann1.438RTV Arachis hypogaea HOM05D001349 ORTHO05D008727 9.2e-14 79.7 62 67.7
arahy.Tifrunner.gnm1.ann1.Q3AJBC Arachis hypogaea HOM05D001349 ORTHO05D008727 9.2e-14 79.7 62 67.7
VMungo0251G1839 Vigna mungo HOM05D001349 ORTHO05D008727 9.2e-14 79.7 61 62.3
ATR0100G013 Amborella trichopoda HOM05D001349 ORTHO05D008727 2.0e-13 78.6 62 64.5
Zm00001eb081420 Zea mays HOM05D001349 ORTHO05D008727 2.7e-13 78.2 53 66.0
Oeu024304.1 Olea europaea HOM05D001349 ORTHO05D008727 4.5e-13 77.4 63 71.4
Oeu024305.1 Olea europaea HOM05D001349 ORTHO05D008727 4.5e-13 77.4 63 71.4
MBI06_g24644_MAGBIO Magnolia biondii HOM05D001349 ORTHO05D008727 7.8e-13 76.6 65 58.5
CDE02G3879 Ceratophyllum demersum HOM05D001349 ORTHO05D008727 1.0e-12 76.3 51 70.6
Os04g0449500 Oryza sativa ssp. japonica HOM05D001349 ORTHO05D008727 1.3e-12 75.9 53 64.2
CDE06G1470 Ceratophyllum demersum HOM05D001349 ORTHO05D008727 3.9e-12 74.3 51 70.6
MD15G1282200 Malus domestica HOM05D001349 ORTHO05D008727 5.0e-12 73.9 52 75.0
Aqoxy6G01357 Aquilegia oxysepala HOM05D001349 ORTHO05D008727 1.5e-11 72.4 54 68.5
SEGI_21053 Sequoiadendron giganteum HOM05D001349 ORTHO05D008727 9.5e-11 69.7 53 66.0
FAN26G3085 Fragaria x ananassa HOM05D001349 ORTHO05D008727 7.5e-08 60.1 37 78.4
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 4.9e-07 57.4 38 73.7
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 2.4e-06 55.1 38 68.4


User provided reference genes

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